hbp.yml

description: "Pre-processing pipelines for MRI neuroimaging"

long_description: |
  Pre-processing pipelines for MRI neuroimaging.

  Those pipelines work on Matlab and [SPM 12](http://www.fil.ion.ucl.ac.uk/spm).

  They are used daily by [LREN](https://www.unil.ch/lren/en/home.html) to extract features from subjects enrolled in neuroscience research studies.

  In addition, those pipelines are deployed to hospitals participating in the [Medical Informatics platform](https://mip.humanbrainproject.eu) of the [Human Brain Project](https://humanbrainproject.eu) to process clinical MRI scans.

authors:
  - author: John Ashburner,
    author_email: []
    organisation: FIL, UCL
    #organisation_badge: https://img.shields.io/badge/CHUV-LREN-AF4C64.svg
  - author: Lester Melie-Garcia
    author_email: []
    organisation: LREN-CHUV
    organisation_badge: https://img.shields.io/badge/CHUV-LREN-AF4C64.svg

platform: MIP
component:
  mip_building_block: data-factory
  nature: pipeline

license:
  name: GNU Affero GPL 3.0
  badge: https://img.shields.io/badge/license-AGPL--3.0-blue.svg
  url: https://github.com/LREN-CHUV/mri-preprocessing-pipeline/blob/master/LICENSE

code_repositories:
  - name: chuv-gitlab/HBPMedical
    visibility: private
    url: https://___.chuv.ch/data-factory/mri-preprocessing-pipeline/
    git_clone: https://___.chuv.ch/data-factory/mri-preprocessing-pipeline.git
  - name: github/LREN-CHUV
    visibility: public
    url: https://github.io/LREN-CHUV/mri-preprocessing-pipeline/
    git_clone: https://github.io/LREN-CHUV/mri-preprocessing-pipeline.git
  - name: github/HBPMedical
    visibility: public
    url: https://github.io/HBPMedical/mri-preprocessing-pipeline/
    git_clone: https://github.io/HBPMedical/mri-preprocessing-pipeline.git

code_quality_checks: {}

testing:
  unit_testing: []

release_management:
  current_version: 1.3.4
  current_code_release: https://github.com/HBPMedical/mri-preprocessing-pipeline/archive/1.3.4.zip
  release_script: 'publish.sh'

continuous_integration: []

distribution:
  git:
    url: https://github.com/HBPMedical/mri-preprocessing-pipeline.git

planning:
  github:
    name: Issues on Github
    url: https://github.com/LREN-CHUV/mri-preprocessing-pipeline/issues

related_projects:
  - name: data-factory-airflow-dags
    mip_building_block: data-factory
    relationship: other-depends-on