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Protocols_definition.txt
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__Dicom2Nifti__
[fieldmap]
gre_field_mapping_for1mmMPM
gre_field_mapping_for1pt5mmMPM
gre_field_mapping_1acq_rl
Field_mapping
Field_mapping
gre_field_mapping_1acq_rl_64ch
gre_field_mapping_1acq_rl_64ch
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl_20ch
[B1]
al_B1mapping_v2d_for1mmMPM
al_B1mapping_v2d_for1pt5mmMPM
al_B1mapping_v2d
al_B1mapping
al_B1mapping
al_B1mapping_v2d
al_B1mapping_v2d
al_B1mapping_v2d
al_B1mapping_v2d_20ch
[MT]
mt_al_mtflash3d_v2l_1mm
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_1mm
MT_Optimized
mt_nw_mtflash3d
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_1mm
mt_al_mtflash3d_v2l_xpace_800um
mt_al_mtflash3d_v2l_PMC_1mm_thresholding_20ch
[PD]
pd_al_mtflash3d_v2l_1mm
pd_al_mtflash3d_v2l_1pt5mm
pd_al_mtflash3d_v2l_1mm
PD_weighted
pd_nw_mtflash3d
pd_al_mtflash3d_v2l_1pt5mm
pd_al_mtflash3d_v2l_1mm
pd_al_mtflash3d_v2l_xpace_800um_30echoes
pd_al_mtflash3d_v2l_PMC_1mm_thresholding_20ch
[T1]
t1_al_mtflash3d_v2l_1mm
t1_al_mtflash3d_v2l_1pt5mm
t1_al_mtflash3d_v2l_1mm
T1_weighted
t1_nw_mtflash3d
t1_al_mtflash3d_v2l_1pt5mm
t1_al_mtflash3d_v2l_1mm
t1_al_mtflash3d_v2l_xpace_800um
t1_al_mtflash3d_v2l_PMC_1mm_thresholding_20ch
[diffusion]
ep2d_diff_DTI_2mm_30dirs_64ch
cmrr_mbep2d_diff_165dirs_MB3
ep2d_bold_qa
ep2d_diff_DTI_0p9mm_mon_61dirs_64ch
ep2d_diff_DTI_1mm_mon_61dirs_64ch
ep2d_diff_DTI_1p0mm_mon_61dirs_64ch
ep2d_diff_DTI_1p0mm_mon_61dirs_64ch_blipup
ep2d_diff_DTI_1p2mm_mon_61dirs_64ch_blipup
ep2d_diff_DTI_1pt3mm_mon_30dirs
ep2d_diff_DTI_1pt3mm_mon_30dirs_20ch
ep2d_diff_DTI_1pt8mm_mon_30dirs
ep2d_diff_DTI_1pt8mm_mon_30dirs_20ch
ep2d_diff_DTI_2mm_mon_30dirs
ep2d_diff_DTI_2mm_mon_30dirs_20ch
ep2d_diff_HARDI_1pt8mm_mon_61dirs_b2000
ep2d_diff_HARDI_1pt8mm_mon_61dirs_b2000_20ch
ep2d_diff_HARDI_2mm_mon_61dirs_b2500
ep2d_diff_HARDI_2mm_mon_61dirs_b2500_20ch
ep2d_diff_HARDI_2pt2mm_mon_61dirs_b3000
ep2d_diff_HARDI_2pt2mm_mon_61dirs_b3000_20ch
ep2d_diff_NODDI_2mm_64ch
ep2d_diff_NODDI_2mm_mon_101dirs_b2300_64ch_v1
ep2d_diff_NODDI_2mm_mon_101dirs_b2300_64ch_v3
ep2d_diff_NODDI_2mm_mon_101dirs_b2300_64ch_v6
ep2d_diff_NODDI_2mm_mon_101dirs_b2800_64ch
ep2d_diff_NODDI_2mm_mon_101dirs_b2800_64ch_v1
ep2d_diff_NODDI_2mm_mon_101dirs_b2800_64ch_v2
ep2d_diff_NODDI_64ch_2mm_101dirs_bmax2000
ep2d_diff_NODDI_64ch_2mm_101dirs_bmax2000_interleaved
ep2d_diff_NODDI_64ch_2mm_101dirs_bmax2300
ep2d_diff_NODDI_64ch_2mm_bmax2000_interleaved
ep2d_diff_NODDI_64ch_2pt4mm_101dirs_bmax2000
ep2d_diff_NODDI_64ch_2pt4mm_101dirs_bmax2000_interleaved
ep2d_diff_NODDI_64ch_2pt4mm_bmax2000_interleaved
ep2d_diff_mddw_1pt3mm_monopolar
ep2d_diff_mddw_1pt7mm_monopolar
ep2d_diff_wip603_lr
MB1GRAPPA1
MB1GRAPPA1_SIGNAL
MB2GRAPPA1
MB2GRAPPA1_SIGNAL
MB2GRAPPA2
MB2GRAPPA2_SIGNAL
MB3GRAPPA1
MB3GRAPPA1_SIGNAL
MB3GRAPPA2
MB3GRAPPA2_SIGNAL
MB4GRAPPA1
MB4GRAPPA1_SIGNAL
MB4GRAPPA2
MB4GRAPPA2_SIGNAL
ep2d_diff_NODDI_MB2_2pt2mm
ep2d_diff_NODDI_2pt2mm_64ch
[fMRI_dropout]
al_mepi2d_3mm_dropout
__DWI__
[diffusion]
ep2d_diff_NODDI_2mm_64ch
cmrr_mbep2d_diff_165dirs_MB3
ep2d_diff_NODDI_64ch_2mm_101dirs_bmax2300
ep2d_diff_NODDI_2mm_64ch
cmrr_mbep2d_diff_165dirs_MB3
ep2d_diff_NODDI_64ch_2mm_101dirs_bmax2300
ep2d_diff_b1000_dir72_2.3mm
ep2d_diff_b1000_dir73_2mm
ep2d_diff_NODDI_2mm_64ch
ep2d_diff_NODDI_MB2_2pt2mm
ep2d_diff_NODDI_2mm_64ch
[fieldmap]
gre_field_mapping_for1mmMPM
gre_field_mapping_for1mmMPM
gre_field_mapping_for1mmMPM
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl
Field_mapping
Field_mapping
gre_field_mapping_1acq_rl_short
gre_field_mapping_1acq_rl_64ch
gre_field_mapping_1acq_rl_64ch
[ReadoutTimes]
29.1500
28.086
29.1500
29.1500
28.086
29.1500
0.000
0.000
29.1500
49.12
29.1500
__MPM__
[fieldmap]
gre_field_mapping_1acq_rl_short
gre_field_mapping_for1mmMPM
gre_field_mapping_for1pt5mmMPM
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl_short
Field_mapping
Field_mapping
gre_field_mapping_1acq_rl_64ch
gre_field_mapping_1acq_rl_64ch
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl_short
gre_field_mapping_1acq_rl_short
gre_field_mapping_1acq_rl_20ch
[B1]
al_B1mapping_v2d_short
al_B1mapping_v2d_for1mmMPM
al_B1mapping_v2d_for1pt5mmMPM
al_B1mapping_v2d
al_B1mapping_v2d_short
al_B1mapping
al_B1mapping
al_B1mapping_v2d
al_B1mapping_v2d
al_B1mapping_v2d
al_B1mapping_v2d
al_B1mapping_v2d
al_B1mapping_v2d_short
al_B1mapping_v2d_short
al_B1mapping_v2d_20ch
[MT]
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_1mm
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_1mm
mt_al_mtflash3d_v2l_1mm
MT_Optimized
mt_nw_mtflash3d
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_1mm
mt_al_mtflash3d_v2l_800um
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_xpace_800um
mt_al_mtflash3d_v2l_xpace_1pt5mm
mt_al_mtflash3d_v2l_xpace_1pt5mm
mt_al_mtflash3d_v2l_PMC_1mm_thresholding_20ch
[PD]
pd_al_mtflash3d_v2l_1pt5mm
pd_al_mtflash3d_v2l_1mm
pd_al_mtflash3d_v2l_1pt5mm
pd_al_mtflash3d_v2l_1mm
pd_al_mtflash3d_v2l_1mm
PD_weighted
pd_nw_mtflash3d
pd_al_mtflash3d_v2l_1pt5mm
pd_al_mtflash3d_v2l_1mm
pd_al_mtflash3d_v2l_800um
pd_al_mtflash3d_v2l_1pt5mm
pd_al_mtflash3d_v2l_xpace_800um_30echoes
pd_al_mtflash3d_v2l_xpace_1pt5mm
pd_al_mtflash3d_v2l_1pt5mm
pd_al_mtflash3d_v2l_PMC_1mm_thresholding_20ch
[T1]
t1_al_mtflash3d_v2l_1pt5mm
t1_al_mtflash3d_v2l_1mm
t1_al_mtflash3d_v2l_1pt5mm
t1_al_mtflash3d_v2l_1mm
t1_al_mtflash3d_v2l_1mm
T1_weighted
t1_nw_mtflash3d
t1_al_mtflash3d_v2l_1pt5mm
t1_al_mtflash3d_v2l_1mm
t1_al_mtflash3d_v2l_800um
t1_al_mtflash3d_v2l_1pt5mm
t1_al_mtflash3d_v2l_xpace_800um
t1_al_mtflash3d_v2l_xpace_1pt5mm
t1_al_mtflash3d_v2l_xpace_1pt5mm
t1_al_mtflash3d_v2l_PMC_1mm_thresholding_20ch
[Resolution]
1.5mm
1mm
1.5mm
1mm
1mm
1mm
1mm
1.5mm
1mm
800um
1.5mm
800um
1.5mm
1.5mm
1mm
[diffusion]
__MPMOutputs__
[Files]
_A.nii
_MT.nii
_MTw.nii
_PDw.nii
_R1.nii
_R1_m.nii
_R2s.nii
_T1w.nii
[OutputFolder]
mt_al_mtflash3d_v2l_1mm
mt_al_mtflash3d_v2l_1pt5mm
[MPMOutputFolderName]
MPMs
__MPRAGE__
[MPRAGE]
MPRAGE_P3
t1_mprage_tra_p2_iso
Anatomic_MT
__ATLASING__
[STRUCTURAL]
MPR1
MPRAGE_P3
t1_mprage_tra_p2_iso
Anatomic_MT
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_1mm
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_1mm
mt_al_mtflash3d_v2l_1mm
MT_Optimized
mt_nw_mtflash3d
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_1mm
mt_al_mtflash3d_v2l_800um
mt_al_mtflash3d_v2l_1pt5mm
mt_al_mtflash3d_v2l_xpace_800um
mt_al_mtflash3d_v2l_xpace_1pt5mm
mt_al_mtflash3d_v2l_xpace_1pt5mm
3 plane
3D SAG
AX T1
AX T1 FLAIR
AX T1 SE C
AXIAL T1 3D MPRAGE
Ax T1 FLAIR
CORFLAIRr
Cor FLAIR TI_2800ms
FSPGR 3D SAG
MPRAGE
MPRAGE 2 ADNI
MPRAGE ADNI
MPRAGE GRAPPA
MPRAGE GRAPPA 2
MPRAGE GRAPPA2
MPRAGE GRAPPA2adni
MPRAGE GRAPPA_ND
MPRAGE Repeat
MPRAGE SAG
MPRAGE T1 SAG
MPRAGE w GRAPPA
MPRAGE w GRAPPA 2
MPRAGE_GRAPPA
MPRAGE_GRAPPA_ADNI
MPRAGEadni
SAG 3D FSPGR BRAVO STRAIGHT
SAG 3D SPGR
SAG 3D T1
SAG FSPGR 3D
SAG FSPGR BRAVO
SAG MPRAGE GRAPPA
SAG MPRAGE GRAPPA2-NEW2016
SAG MPRAGE GRAPPA_ND
SAG SPGR
SAG SPGR 3D
SAG T1 3D FSPGR
SAG T1 3D FSPGR 3RD REPEAT
SAG T1 3D MPRAGE
SAG T1 3DMPRAGE
SAG T1 MPRAGE
STRUC BRAVO SAG3D ARC
STRUC T2FLAIR AX
Sag MPRAGE GRAPPA
Sag MPRAGE GRAPPA_ND
Sag T1
T1
T1 REPEAT
T1 Repeat
T1W_3D_FFE AX
axial spgr
sT1W_3D_FFE
sT1W_3D_ISO
sT1W_3D_TFE
sT2WPD_TSE
sag
sag 3D FSPGR BRAVO straight
sag mprage
t1_mpr_ns_sag_p2_iso
tra_T1_MPRAGE
T1_mprage
T1W sag
T1W_SE
Ax T1 SE memp
Ax T1 SE memp mdc
Ax T1 SE +c
cor T1 SE memp mdc
Cor T1 SE +C
Sag T1 SE memp
Sag T1 SE +c
SmartBrain
Sag 3D T1 FSPGR
s3DT1 ISO 1mm HR
T1 SE AXIAL
VT1_3D_TFE 3MIN SENSE
Ax T1 SE
T1W_SE
Ax T1 MEMP
s3DT1TFE SENSE PJ
T1W_SE CLEAR
Ax T1 FSE
SAG 3D T1 EG GADO
T1_3D_TFE 3MIN
T1_3D_TFE
T13D PARENCHYME_TFE
Coro 3D T1 BRAVO IR
SAG T1 MEMP
T1_3D_TFE 3MIN SENSE
VT1_3D_TFE SENSE
VT1W_3D SAG SENSE
3D T1 SPGR thrombo veine GD
Ax T1 HR
Ax T1memp GADO
Sag T1 FSE 2.5mm
T1 SE TRA
SAG T1
T1 MPR 3D
T1W_rapide1.40
T1 3D SAG
T1 3D TFE SAG *
T1_3D_TFE 3MIN40 SENSE
SET1_SAG
T1W_SE rapide
AX T1
SPACE T1SAG
T1 TSE CORO 4MM INJ
AX T1 (IR)
s3DT1TFE +++
T1 3D SAG
T1 3D HR AX
VWIP 3DT1_BrainView SENSE
T1W_SE_sag
Ax 3D T1 BRAVO
3D T1 SPGR thrombo veine
3D T1
T1 3D - 4min
Vs3DT1TFE SENSE PJ SENSE
T1W_rap1.40
T1 3D HR SAG
VT1W_3D GADO CLEAR
T1 3D MPRAGE AX
sT1W_3D_TFE
T1 3mm
T1 TARDIF
Sag T1
VsT1W_3D_TFE SENSE
T1/SE SAG
T1 3D
T1 SE SAG
T1_3D_TFE 3MIN40
3D CORO T1
Ax T1
T1_3D_TFE_HR 0.6mm
Coro 3D T1 BRAVO IRPREP
AX T1 MEMP gado
3D T1 IR prep 450
T1W_SE GADO
T1SE SAG 4mm
Sag T1 CervDors
T1W_TSE
T1-SE-AX 5/1mm
3D.T1 ASSET
CORO T1
3DT1classic
T1 MPR 3D SAG ISO1mm
3D T1 IR Prep 400
AX T1 VIBE CAIPI DIXON_opp
T1W_HR_aTSE
T1Map_LAVLongT1 PRE GADO_MOCO
Ax 3D T1 BRAVO IRPREP
AX T1 FC GADO
Ax T1 memp
SAG 3D T1 EG
AXIAL T1
AX 3D T1 BRAVO
AX T1 IR 3D SPACE
T13D PARENCHYME_TFE*
AX T1 AVT PIED
T1_3D_TFE GD
s3DT1TFE SENSE PJ SENSE
3D-SE-BV-T1 **GD**
SET1 AXIAL
T1 SANS AP
Vs3DT1TFE SENSE PJ-LT
Ax 3D T1 1mm
T2 TSE AX T10-T11
AX T1 FLAIR
T1 DYN TSE COR OK GUSTAVO NOV2015
VT1W_3D CLEAR
SPACE T1
Ax T1 FLAIR
3D T1 FSPGR parenchyme
__fMRI__
[EPI]
al_mepi2d_3mm
al_mepi2d_v2f_3mm
al_mepi2d_v2f_3mm
al_mepi2d_v2f_3mm_20Ch
al_mepi2d_v2f_3mm_64Ch
al_mepi2d_v2f_3mm_NamingReading
al_mepi2d_v2f_3mm_Semantic
al_mepi3d_v3c_1pt5mm_thick
al_mepi3d_v3c_2mm_thick
al_mepi3d_v3c_3mm
al_mepi2d_3mm_dropout
[fieldmap]
gre_field_mapping_1acq_rl_short
gre_field_mapping_for1mmMPM
gre_field_mapping_1acq_rl_64ch
gre_field_mapping_for1pt5mmMPM
gre_field_mapping_1acq_rl
Field_mapping
gre_field_mapping_1acq_rl_64ch
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl
gre_field_mapping_1acq_rl_64ch
[pmDefaultFiles]
None.m
pm_defaults_Prisma_3mm.m
pm_defaults_Prisma_3mm.m
None.m
None.m
pm_defaults_Prisma_3mm.m
pm_defaults_Prisma_3mm.m
pm_defaults_Prisma_1pt5mm.m
pm_defaults_Prisma_2mm.m
pm_defaults_Prisma_3mm_PI.m
pm_defaults_Prisma_3mm.m
[NDummies]
0
5
5
0
0
5
5
0
0
0
0
[Resolution]
'3mm'
'3mm'
'3mm'
'3mm'
'3mm'
'3mm'
'3mm'
'1.5mm'
'2mm'
'3mm'
'3mm'
[end]