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Genes not parsed if they have an "@" symbol #823

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HettieC opened this issue Mar 14, 2024 · 1 comment
Closed

Genes not parsed if they have an "@" symbol #823

HettieC opened this issue Mar 14, 2024 · 1 comment

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@HettieC
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HettieC commented Mar 14, 2024

Hello!

If gene IDs have an "@" symbol, they do not parse correctly:

_parse_grr_to_sbml("A@1")
returns the error
ERROR: DomainError with A@1: cannot parse GRR Stacktrace: [1] _parse_grr_to_sbml(str::String) @ COBREXA ~/.julia/packages/COBREXA/IheBW/src/base/utils/gene_associations.jl:189 [2] top-level scope @ ~/Documents/Projects/ECYeast/src/plotting/conservation_of_metabolism.jl:8

exaexa added a commit to COBREXA/JSONFBCModels.jl that referenced this issue Apr 23, 2024
@exaexa
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exaexa commented Apr 27, 2024

Fixed in develop and in JSONFBC package. Will release eventually, please use the develop version for now if required.

@exaexa exaexa closed this as completed Apr 27, 2024
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