v2.0 staging PR

[exaexa]

This is a container for all breaking PRs that will be merged into 2.0.

Rules:

• keep this sufficienty rebased/backmerged and mergeable into develop

Notes about what not to forget before merging to develop:

• check if the docs build (this PR should be ❌ otherwise)
• remove the next→develop doc build trigger
• quadruple check rebase status

Leftovers from other issues:

• kill all "previously internal" identifiers that start with _
• fix docs
• write a doc page about the module structure

[codecov]

Codecov Report

Base: 90.60% // Head: 90.21% // Decreases project coverage by -0.38% ⚠️

Coverage data is based on head (8c04d42) compared to base (40c15f8).
Patch coverage: 89.89% of modified lines in pull request are covered.

❗ Current head 8c04d42 differs from pull request most recent head 2282aa7. Consider uploading reports for the commit 2282aa7 to get more accurate results

Additional details and impacted files

@@             Coverage Diff             @@
##           develop     #673      +/-   ##
===========================================
- Coverage    90.60%   90.21%   -0.39%     
===========================================
  Files           82       82              
  Lines         2150     2106      -44     
===========================================
- Hits          1948     1900      -48     
- Misses         202      206       +4     

Impacted Files	Coverage Δ
src/analysis/flux_balance_analysis.jl	100.00% <ø> (ø)
src/analysis/max_min_driving_force.jl	93.84% <ø> (ø)
src/analysis/modifications/loopless.jl	100.00% <ø> (ø)
...alysis/reconstruction/gapfill_minimum_reactions.jl	88.63% <ø> (ø)
src/io/show/FluxSummary.jl	0.00% <0.00%> (ø)
src/io/show/FluxVariabilitySummary.jl	0.00% <0.00%> (ø)
src/io/show/Serialized.jl	0.00% <0.00%> (ø)
src/macros/model_wrapper.jl	0.00% <ø> (ø)
src/reconstruction/modifications/enzymes.jl	100.00% <ø> (ø)
src/types/ReactionStatus.jl	100.00% <ø> (ø)
... and 67 more

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[exaexa]

Let's move this to COBREXA namespace ASAP to get the github-based testsuite working (apparently we need to push the rules to master before it gets sourced)

[exaexa]

COBREXA 2.0 continues at https://github.com/COBREXA/COBREXA.jl