is it possible to use this with a distance matrix input?

[sg-s]

Can I only provide a NxN matrix of pairwise distances, as in van der Maaten's tsne_d ?

[linqiaozhi]

An old branch supports this feature, and it would be great to implement for this new version. Please see #62 (comment).

[sg-s]

thanks, will look there!

[young-stack]

Can I only provide a NxN matrix of pairwise distances, as in van der Maaten's tsne_d ?

if you want using other distance metrics method, you can compute row_P, col_P, and var_P by yourself and set opts.load_affinities as load.

[sg-s]

Can I only provide a NxN matrix of pairwise distances, as in van der Maaten's tsne_d ?

if you want using other distance metrics method, you can compute row_P, col_P, and var_P by yourself and set opts.load_affinities as load.

No, I have a precomputed distance matrix that I want to use.