CITATION.cff

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cff-version: 1.2.0
title: >-
  DivBrowse - interactive visualization and
  exploratory data analysis of variant call matrices
message: >-
  If you use this software, please cite it using the
  metadata from this file.
preferred-citation:
  authors:
    - given-names: Patrick
      family-names: König
      email: koenig@ipk-gatersleben.de
      orcid: 'https://orcid.org/0000-0002-8948-6793'
      affiliation: >-
        Leibniz Institute of Plant Genetics and Crop
        Plant Research (IPK) Gatersleben, 06466
        Seeland, Germany
    - given-names: Sebastian
      family-names: Beier
      orcid: 'https://orcid.org/0000-0002-2177-8781'
      affiliation: >-
        Leibniz Institute of Plant Genetics and Crop
        Plant Research (IPK) Gatersleben, 06466
        Seeland, Germany
      email: s.beier@fz-juelich.de
    - given-names: Martin
      family-names: Mascher
      email: mascher@ipk-gatersleben.de
      affiliation: >-
        Leibniz Institute of Plant Genetics and Crop
        Plant Research (IPK) Gatersleben, 06466
        Seeland, Germany
      orcid: 'https://orcid.org/0000-0001-6373-6013'
    - given-names: Nils
      family-names: Stein
      orcid: 'https://orcid.org/0000-0003-3011-8731'
      affiliation: >-
        Leibniz Institute of Plant Genetics and Crop
        Plant Research (IPK) Gatersleben, 06466
        Seeland, Germany
      email: stein@ipk-gatersleben.de
    - given-names: Matthias
      family-names: Lange
      email: lange@ipk-gatersleben.de
      orcid: 'https://orcid.org/0000-0002-4316-078X'
      affiliation: >-
        Leibniz Institute of Plant Genetics and Crop
        Plant Research (IPK) Gatersleben, 06466
        Seeland, Germany
    - given-names: Uwe
      family-names: Scholz
      orcid: 'https://orcid.org/0000-0001-6113-3518'
      email: scholz@ipk-gatersleben.de
      affiliation: >-
        Leibniz Institute of Plant Genetics and Crop
        Plant Research (IPK) Gatersleben, 06466
        Seeland, Germany
  title: DivBrowse - interactive visualization and exploratory data analysis of variant call matrices
  type: article
  doi: 10.1093/gigascience/giad025
  journal: GigaScience
  volume: 12
  year: 2023
type: software
authors:
  - given-names: Patrick
    family-names: König
    email: koenig@ipk-gatersleben.de
    orcid: 'https://orcid.org/0000-0002-8948-6793'
    affiliation: >-
      Leibniz Institute of Plant Genetics and Crop
      Plant Research (IPK) Gatersleben, 06466
      Seeland, Germany
  - given-names: Sebastian
    family-names: Beier
    orcid: 'https://orcid.org/0000-0002-2177-8781'
    affiliation: >-
      Leibniz Institute of Plant Genetics and Crop
      Plant Research (IPK) Gatersleben, 06466
      Seeland, Germany
    email: s.beier@fz-juelich.de
  - given-names: Martin
    family-names: Mascher
    email: mascher@ipk-gatersleben.de
    affiliation: >-
      Leibniz Institute of Plant Genetics and Crop
      Plant Research (IPK) Gatersleben, 06466
      Seeland, Germany
    orcid: 'https://orcid.org/0000-0001-6373-6013'
  - given-names: Nils
    family-names: Stein
    orcid: 'https://orcid.org/0000-0003-3011-8731'
    affiliation: >-
      Leibniz Institute of Plant Genetics and Crop
      Plant Research (IPK) Gatersleben, 06466
      Seeland, Germany
    email: stein@ipk-gatersleben.de
  - given-names: Matthias
    family-names: Lange
    email: lange@ipk-gatersleben.de
    orcid: 'https://orcid.org/0000-0002-4316-078X'
    affiliation: >-
      Leibniz Institute of Plant Genetics and Crop
      Plant Research (IPK) Gatersleben, 06466
      Seeland, Germany
  - given-names: Uwe
    family-names: Scholz
    orcid: 'https://orcid.org/0000-0001-6113-3518'
    email: scholz@ipk-gatersleben.de
    affiliation: >-
      Leibniz Institute of Plant Genetics and Crop
      Plant Research (IPK) Gatersleben, 06466
      Seeland, Germany
identifiers:
  - type: doi
    value: 10.1093/gigascience/giad025
    description: The DivBrowse paper on Oxford Academic GigaScience Journal.
  - type: url
    value: 'https://divbrowse.ipk-gatersleben.de'
    description: Project homepage
repository-code: 'https://github.com/IPK-BIT/divbrowse'
url: 'https://divbrowse.ipk-gatersleben.de/'
repository-artifact: 'https://pypi.org/project/divbrowse/'
doi: 10.1093/gigascience/giad025
journal: GigaScience
volume: 12
year: 2023
abstract: >-
  DivBrowse is a software for interactive
  visualization and analysis of the diversity of
  genomic variants. It uses VCF and GFF3 files as
  data input and consists of a web server written in
  Python and a GUI written in Javascript.
keywords:
  - genomics
  - data visualization
  - variation data
  - variant call format
  - biodiversity
license: MIT
#version: 1.0.1
date-released: '2023-04-21'