Fix tests, bump python version to 3.11 #126
Workflow file for this run
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name: CI | |
on: | |
push: | |
branches: | |
- main | |
tags: | |
- '**' | |
pull_request: | |
jobs: | |
tests: | |
name: test coverage | |
strategy: | |
matrix: | |
include: | |
- python-version: "3.11" | |
os: ubuntu-latest | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
ref: ${{ github.event.pull_request.head.sha }} | |
- name: create and activate env | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
activate-environment: mutis | |
environment-file: environment.yml | |
auto-update-conda: true | |
python-version: ${{ matrix.python-version }} | |
- name: install mutis | |
run: | | |
pip install -e . | |
- name: test coverage | |
run: | | |
make test-cov | |
codecov -X gcov | |
docs: | |
name: docs building | |
strategy: | |
matrix: | |
include: | |
- python-version: "3.11" | |
os: ubuntu-latest | |
runs-on: ${{ matrix.os }} | |
defaults: | |
run: | |
shell: bash -l {0} | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
ref: ${{ github.event.pull_request.head.sha }} | |
- name: create and activate env | |
uses: conda-incubator/setup-miniconda@v3 | |
with: | |
activate-environment: mutis | |
environment-file: environment.yml | |
auto-update-conda: true | |
python-version: ${{ matrix.python-version }} | |
- name: install mutis | |
run: | | |
pip install -e . | |
- name: build docs | |
run: | | |
make docs-sphinx |