update_manifest_dl4miceverywhere.yml

name: Update the manifest with DL4MiceEverywhere information
on:
  # At 05:30 AM of every day
  schedule:
    - cron: "30 5 * * *"
  workflow_dispatch:

jobs:
  update-manifest:
    runs-on: ubuntu-latest
    steps:
      - name: Clone ZeroCostDL4Mic repository
        uses: actions/checkout@v4
        with:
            path: ZeroCostDL4Mic
      - name: Clone DL4MicEverywhere repository
        uses: actions/checkout@v4
        with:
            repository: HenriquesLab/DL4MicEverywhere
            path: DL4MicEverywhere
      - name: Install requirements
        working-directory: ./ZeroCostDL4Mic
        run: pip install -r Tools/CI_requirements.txt
      - name: Update the versioning on the manifest
        working-directory: ./ZeroCostDL4Mic
        run: python3 Tools/update_manifest_versioning.py
      - name: Update the DL4MicEverywhere information on the manifest
        working-directory: ./ZeroCostDL4Mic
        run: python3 Tools/update_manifest_dl4miceverywhere.py
      - name: Commit the changes
        uses: stefanzweifel/git-auto-commit-action@v5
        with:
            repository: ./ZeroCostDL4Mic
            commit_message: GitHub Action - Update manifest with DL4MiceEverywhere information