_pkgdown.yml

destination: docs
reference:
- title: Help
  contents:
  - '`rfacts-package`'
- title: Configuration
  contents:
  - '`reset_rfacts_paths`'
  - '`rfacts_paths`'
  - '`rfacts_sitrep`'
- title: Top-level functions
  contents:
  - '`run_facts`'
  - '`run_flfll`'
  - '`run_engine`'
- title: Linux engines
  contents:
  - '`run_engine_contin`'
  - '`run_engine_dichot`'
  - '`run_engine_multep`'
  - '`run_engine_tte`'
  - '`run_engine_aipf_contin`'
  - '`run_engine_aipf_dichot`'
  - '`run_engine_aipf_tte`'
  - '`run_engine_crm`'
- title: CSV files
  contents:
  - '`get_csv_files`'
  - '`overwrite_csv_files`'
  - '`read_patients`'
  - '`read_weeks`'
  - '`read_mcmc`'
  - '`read_s1_patients`'
  - '`read_s1_weeks`'
  - '`read_s1_mcmc`'
  - '`read_s2_patients`'
  - '`read_s2_weeks`'
  - '`read_s2_mcmc`'
  - '`read_master_patients`'
  - '`read_master_weeks`'
  - '`read_master_mcmc`'
  - '`read_cohorts`'
  - '`read_simulations`'
  - '`read_csv_special`'
- title: FACTS files
  contents:
  - '`get_facts_file_example`'
  - '`get_facts_scenarios`'
  - '`get_facts_version`'
  - '`get_facts_versions`'
  - '`get_facts_engine`'
  - '`read_facts`'
  - '`write_facts`'
- title: Param files
  contents:
  - '`prep_param_files`'
  - '`get_param_files`'
  - '`get_param_dirs`'