Corrected link to the phenology data #104

	on:
	push:
	branches:
	- master

	name: Render book and slides

	jobs:
	build:
	runs-on: ubuntu-20.04
	steps:
	- uses: actions/checkout@master

	- uses: r-lib/actions/setup-pandoc@v2

	- uses: quarto-dev/quarto-actions/setup@v2
	with:
	tinytex: true

	- uses: r-lib/actions/setup-r@v2
	with:
	r-version: '4.2.0'

	- name: Install R dependencies
	run: make install

	- name: Render slides in html
	run: make

	- name: Convert slides from html to pdf
	run: \|
	for VARIABLE in `ls -d bloc*`
	do
	sudo chmod ugo+rwx $VARIABLE
	docker run --rm -t -v `pwd`:/slides astefanutti/decktape $VARIABLE/ $VARIABLE/$VARIABLE.pdf
	done

	- name: Render quarto book
	uses: quarto-dev/quarto-actions/render@v2
	with:
	to: html
	path: livre

	- name: prepare html and pdf files for deployment
	run: \|
	mkdir slides
	cp -r ./assets ./slides
	for dir in `ls -d bloc*`
	do
	mkdir -p ./slides/$dir
	cp ./$dir/index.html ./slides/$dir
	cp ./$dir/$dir.pdf ./slides/$dir
	cp -r ./$dir/assets ./slides/$dir
	if [ -d "./$dir/index_files" ]; then cp -r ./$dir/index_files ./slides/$dir; fi
	done
	cp -r ./livre/_book/* ./slides/
	touch ./slides/.nojekyll

	- name: Deploy gh_pages
	uses: JamesIves/[email protected]
	with:
	token: ${{ secrets.GITHUB_TOKEN }}
	branch: gh-pages
	folder: slides
	single-commit: true

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