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Documentation for the variables in genomicContexts? #95

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ramiromagno opened this issue Oct 30, 2018 · 1 comment
Open

Documentation for the variables in genomicContexts? #95

ramiromagno opened this issue Oct 30, 2018 · 1 comment
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@ramiromagno
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Documentation for the variables of genomicContexts?

isIntergenic
isUpstream
isDownstream
distance
source
mappingMethod
isClosestGene
gene.geneName              
gene.entrezGeneIds
gene.ensemblGeneIds

I can guess from the var names but I'd like to be sure, namely, explanations on the exact methodology to call isIntergenic, isUpstream or isDownstream or reference to others' documentation.
@ljwh2
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ljwh2 commented Aug 23, 2022

related to goci#745

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@twhetzel @ramiromagno @ljwh2