diff --git a/mache/cime_machine_config/config_machines.xml b/mache/cime_machine_config/config_machines.xml
index ff0c583f..593acc1b 100644
--- a/mache/cime_machine_config/config_machines.xml
+++ b/mache/cime_machine_config/config_machines.xml
@@ -190,6 +190,7 @@
module
+ cpe
cray-hdf5-parallel
cray-netcdf-hdf5parallel
cray-parallel-netcdf
@@ -218,8 +219,8 @@
PrgEnv-gnu/8.5.0
- gcc/12.2.0
- cray-libsci/23.02.1.1
+ gcc-native/12.3
+ cray-libsci/23.12.5
@@ -229,35 +230,23 @@
PrgEnv-nvidia
- nvidia/22.7
- cray-libsci/23.02.1.1
+ nvidia/24.5
+ cray-libsci/23.12.5
PrgEnv-aocc
- aocc/4.0.0
- cray-libsci/23.02.1.1
+ aocc/4.1.0
+ cray-libsci/23.12.5
-
+
craype-accel-host
craype/2.7.30
cray-mpich/8.1.28
cray-hdf5-parallel/1.12.2.9
cray-netcdf-hdf5parallel/4.9.0.9
cray-parallel-netcdf/1.12.3.9
-
-
-
- craype-accel-host
- craype/2.7.20
- cray-mpich/8.1.25
- cray-hdf5-parallel/1.12.2.3
- cray-netcdf-hdf5parallel/4.9.0.3
- cray-parallel-netcdf/1.12.3.3
-
-
-
cmake/3.24.3
evp-patch
@@ -367,6 +356,7 @@
module
+ cpe
cray-hdf5-parallel
cray-netcdf-hdf5parallel
cray-parallel-netcdf
@@ -377,12 +367,14 @@
PrgEnv-nvidia
PrgEnv-cray
PrgEnv-aocc
+ gcc-native
intel
intel-oneapi
nvidia
aocc
cudatoolkit
climate-utils
+ cray-libsci
matlab
craype-accel-nvidia80
craype-accel-host
@@ -392,24 +384,24 @@
- PrgEnv-gnu/8.3.3
- gcc/11.2.0
+ PrgEnv-gnu/8.5.0
+ gcc-native/12.3
PrgEnv-nvidia
- nvidia/22.7
+ nvidia/24.5
- cudatoolkit/11.7
+ cudatoolkit/12.2
craype-accel-nvidia80
- cudatoolkit/11.7
+ cudatoolkit/12.2
craype-accel-nvidia80
- gcc-mixed/11.2.0
+ gcc-native-mixed/12.3
@@ -421,12 +413,12 @@
- cray-libsci/23.02.1.1
- craype/2.7.20
- cray-mpich/8.1.25
- cray-hdf5-parallel/1.12.2.3
- cray-netcdf-hdf5parallel/4.9.0.3
- cray-parallel-netcdf/1.12.3.3
+ cray-libsci/23.12.5
+ craype/2.7.30
+ cray-mpich/8.1.28
+ cray-hdf5-parallel/1.12.2.9
+ cray-netcdf-hdf5parallel/4.9.0.9
+ cray-parallel-netcdf/1.12.3.9
cmake/3.24.3
@@ -434,6 +426,7 @@
$CIME_OUTPUT_ROOT/$CASE/run
$CIME_OUTPUT_ROOT/$CASE/bld
0.1
+ 0.20
1
@@ -454,6 +447,9 @@
1
+
+ $SHELL{if [ -z "$MOAB_ROOT" ]; then echo /global/cfs/cdirs/e3sm/software/moab/gnugpu ; else echo "$MOAB_ROOT"; fi}
+
$SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/gcc-11.2.0; else echo "$ADIOS2_ROOT"; fi}
@@ -588,10 +584,9 @@
/global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
software
MPI_Bcast
- $SHELL{if [ -z "$Albany_ROOT" ]; then echo /global/common/software/e3sm/mali_tpls/albany-e3sm-serial-release-gcc; else echo "$Albany_ROOT"; fi}
- $SHELL{if [ -z "$Trilinos_ROOT" ]; then echo /global/common/software/e3sm/mali_tpls/trilinos-e3sm-serial-release-gcc; else echo "$Trilinos_ROOT"; fi}
$ENV{CRAY_NETCDF_HDF5PARALLEL_PREFIX}
$ENV{CRAY_PARALLEL_NETCDF_PREFIX}
+ 4000MB
$SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/intel-2023.1.0; else echo "$ADIOS2_ROOT"; fi}
@@ -599,6 +594,8 @@
$SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/gcc-11.2.0; else echo "$ADIOS2_ROOT"; fi}
Generic
+ $SHELL{if [ -z "$Albany_ROOT" ]; then echo /global/common/software/e3sm/albany/2024.03.26/gcc/11.2.0; else echo "$Albany_ROOT"; fi}
+ $SHELL{if [ -z "$Trilinos_ROOT" ]; then echo /global/common/software/e3sm/trilinos/15.1.1/gcc/11.2.0; else echo "$Trilinos_ROOT"; fi}
$SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/nvidia-22.7; else echo "$ADIOS2_ROOT"; fi}
@@ -614,6 +611,13 @@
$SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/aocc-4.0.0; else echo "$ADIOS2_ROOT"; fi}
+
+ $SHELL{if [ -z "$MOAB_ROOT" ]; then echo /global/cfs/cdirs/e3sm/software/moab/intel; else echo "$MOAB_ROOT"; fi}
+
+
+ $SHELL{if [ -z "$MOAB_ROOT" ]; then echo /global/cfs/cdirs/e3sm/software/moab/gnu; else echo "$MOAB_ROOT"; fi}
+
+
-1
@@ -680,12 +684,14 @@
PrgEnv-nvidia
PrgEnv-cray
PrgEnv-aocc
+ gcc-native
intel
intel-oneapi
nvidia
aocc
cudatoolkit
climate-utils
+ cray-libsci
matlab
craype-accel-nvidia80
craype-accel-host
@@ -695,26 +701,24 @@
- PrgEnv-gnu/8.3.3
- gcc/11.2.0
-
+ PrgEnv-gnu/8.5.0
+ gcc-native/12.3
PrgEnv-nvidia
- nvidia/23.9
+ nvidia/24.5
- cudatoolkit/11.7
-
+ cudatoolkit/12.2
craype-accel-nvidia80
- cudatoolkit/11.7
+ cudatoolkit/12.2
craype-accel-nvidia80
+ gcc-native-mixed/12.3
@@ -726,26 +730,20 @@
- cray-libsci/23.02.1.1
- craype/2.7.20
- cray-mpich/8.1.25
- cray-hdf5-parallel/1.12.2.3
- cray-netcdf-hdf5parallel/4.9.0.3
- cray-parallel-netcdf/1.12.3.3
-
+ cray-parallel-netcdf/1.12.3.9
cmake/3.24.3
- evp-patch
$CIME_OUTPUT_ROOT/$CASE/run
$CIME_OUTPUT_ROOT/$CASE/bld
0.1
+ 0.20
1
@@ -766,6 +764,9 @@
1
+
+ $SHELL{if [ -z "$MOAB_ROOT" ]; then echo /global/cfs/cdirs/e3sm/software/moab/gnugpu ; else echo "$MOAB_ROOT"; fi}
+
$SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/gcc-11.2.0; else echo "$ADIOS2_ROOT"; fi}
@@ -823,6 +824,7 @@
module
+ cpe
cray-hdf5-parallel
cray-netcdf-hdf5parallel
cray-parallel-netcdf
@@ -850,36 +852,35 @@
- PrgEnv-gnu
- gcc-native
- cray-libsci
+ PrgEnv-gnu/8.5.0
+ gcc-native/13.2
+ cray-libsci/24.03.0
- PrgEnv-intel
- intel
+ PrgEnv-intel/8.5.0
+ intel/2024.1.0
PrgEnv-nvidia
nvidia/24.5
- cray-libsci
+ cray-libsci/24.03.0
PrgEnv-aocc
- aocc/4.0.1
- cray-libsci
+ aocc/4.1.0
+ cray-libsci/24.03.0
craype-accel-host
- cray-libsci
- craype/2.7.30
- cray-mpich/8.1.28
- cray-hdf5-parallel/1.12.2.9
- cray-netcdf-hdf5parallel/4.9.0.9
- cray-parallel-netcdf/1.12.3.9
+ craype/2.7.31.11
+ cray-mpich/8.1.29
+ cray-hdf5-parallel/1.12.2.11
+ cray-netcdf-hdf5parallel/4.9.0.11
+ cray-parallel-netcdf/1.12.3.11
cmake/3.24.3
@@ -887,6 +888,7 @@
$CIME_OUTPUT_ROOT/$CASE/run
$CIME_OUTPUT_ROOT/$CASE/bld
0.1
+ 0.20
1
@@ -901,12 +903,44 @@
MPI_Bcast
$ENV{CRAY_NETCDF_HDF5PARALLEL_PREFIX}
$ENV{CRAY_PARALLEL_NETCDF_PREFIX}
+ 4000MB
+
+
+ $SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/intel-2023.1.0; else echo "$ADIOS2_ROOT"; fi}
+
+
+ $SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/gcc-11.2.0; else echo "$ADIOS2_ROOT"; fi}
+ Generic
+ $SHELL{if [ -z "$Albany_ROOT" ]; then echo /global/common/software/e3sm/albany/2024.03.26/gcc/11.2.0; else echo "$Albany_ROOT"; fi}
+ $SHELL{if [ -z "$Trilinos_ROOT" ]; then echo /global/common/software/e3sm/trilinos/15.1.1/gcc/11.2.0; else echo "$Trilinos_ROOT"; fi}
+
+
+ $SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/nvidia-22.7; else echo "$ADIOS2_ROOT"; fi}
+
+
+ $SHELL{if [ -z "$BLAS_ROOT" ]; then echo $NVIDIA_PATH/compilers; else echo "$BLAS_ROOT"; fi}
+ $SHELL{if [ -z "$LAPACK_ROOT" ]; then echo $NVIDIA_PATH/compilers; else echo "$LAPACK_ROOT"; fi}
+ NVHPC
+
+
+ Intel10_64_dyn
+
+
+ $SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /global/cfs/cdirs/e3sm/3rdparty/adios2/2.9.1/cray-mpich-8.1.25/aocc-4.0.0; else echo "$ADIOS2_ROOT"; fi}
+
+ $SHELL{if [ -z "$MOAB_ROOT" ]; then echo /global/cfs/cdirs/e3sm/software/moab/intel; else echo "$MOAB_ROOT"; fi}
+
+
+ $SHELL{if [ -z "$MOAB_ROOT" ]; then echo /global/cfs/cdirs/e3sm/software/moab/gnu; else echo "$MOAB_ROOT"; fi}
+
+
-1
+
Spock. NCCS moderate-security system that contains similar hardware and software as the upcoming Frontier system at ORNL.
.*spock.*
@@ -1115,306 +1149,11 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
-->
-
- Crusher. NCCS moderate-security system that contains similar hardware and software as the upcoming Frontier system at ORNL. 192 AMD EPYC 7A53 64C nodes, 128 hwthreads, 512GB DDR4, 4 MI250X GPUs
- .*crusher.*
- Linux
- crayclang,gnu,amdclang,gnugpu,crayclanggpu,amdclanggpu
- mpich
- cli115
- /lustre/orion/cli115/world-shared/crusher
- .*
- /lustre/orion/$PROJECT/proj-shared/$ENV{USER}/e3sm_scratch/crusher
- /lustre/orion/cli115/world-shared/e3sm/inputdata
- /lustre/orion/cli115/world-shared/e3sm/inputdata/atm/datm7
- $CIME_OUTPUT_ROOT/archive/$CASE
- /lustre/orion/cli115/world-shared/e3sm/baselines/crusher/$COMPILER
- /lustre/orion/cli115/world-shared/e3sm/tools/cprnc/cprnc
- 8
- 1
- slurm
- e3sm
- 56
- 56
- 8
- 8
- 8
- TRUE
-
- srun
-
- -l -K -n {{ total_tasks }} -N {{ num_nodes }}
- -c $ENV{OMP_NUM_THREADS}
- $ENV{NTASKS_PER_GPU}
- $ENV{GPU_BIND_ARGS}
-
-
-
- /usr/share/lmod/lmod/init/sh
- /usr/share/lmod/lmod/init/csh
- /usr/share/lmod/lmod/init/perl
- /usr/share/lmod/lmod/init/env_modules_python.py
- /usr/share/lmod/lmod/libexec/lmod perl
- module
- module
- /usr/share/lmod/lmod/libexec/lmod python
-
-
- PrgEnv-cray PrgEnv-cray/8.3.3
- cce cce/15.0.1
-
-
- craype craype/2.7.20
-
-
- craype-accel-amd-gfx90a
- rocm/5.4.0
-
-
-
- PrgEnv-cray PrgEnv-amd/8.3.3
- amd amd/5.4.0
-
-
- craype-accel-amd-gfx90a
-
-
-
- PrgEnv-cray PrgEnv-gnu/8.3.3
- gcc gcc/11.2.0
-
-
- craype-accel-amd-gfx90a
- rocm/5.4.0
-
-
- cray-python/3.9.13.1
- subversion/1.14.1
- git/2.36.1
- cmake/3.21.3
- zlib/1.2.11
- cray-hdf5-parallel/1.12.2.1
- cray-netcdf-hdf5parallel/4.9.0.1
- cray-parallel-netcdf/1.12.3.1
-
-
- $CIME_OUTPUT_ROOT/$CASE/run
- $CIME_OUTPUT_ROOT/$CASE/bld
- 0.1
- 0.25
- 0
-
- $ENV{NETCDF_DIR}
- $ENV{PNETCDF_DIR}
-
-
-
-
- $ENV{CRAY_LIBSCI_DIR}/amd/4.0/x86_64/lib:$ENV{LD_LIBRARY_PATH}
-
-
- --ntasks-per-gpu=$SHELL{echo "`./xmlquery --value MAX_MPITASKS_PER_NODE`/8"|bc}
- --gpu-bind=closest
- romio_cb_read=disable
- 0
-
-
- 10
- 3
-
-
- 128M
- spread
- threads
-
-
-
-
- Crusher. NCCS moderate-security system that contains similar hardware and software as the upcoming Frontier system at ORNL. 192 AMD EPYC 7A53 64C nodes, 128 hwthreads, 512GB DDR4, 4 MI250X GPUs
- .*crusher.*
- Linux
- crayclang-scream
- mpich
- CLI115
- /lustre/orion/cli133/proj-shared/$ENV{USER}/e3sm_scratch/crusher
- /lustre/orion/cli115/world-shared/e3sm/inputdata
- /lustre/orion/cli115/world-shared/e3sm/inputdata/atm/datm7
- $CIME_OUTPUT_ROOT/archive/$CASE
- /lustre/orion/cli133/world-shared/e3sm/baselines/$COMPILER
- /lustre/orion/cli115/world-shared/e3sm/tools/cprnc/cprnc
- 8
- 1
- slurm
- e3sm
- 56
- 56
- TRUE
-
-
- srun
-
- -l -K -n {{ total_tasks }} -N {{ num_nodes }}
-
-
- --threads-per-core=1
- -c $ENV{OMP_NUM_THREADS}
- -m *:block
-
-
-
-
-
- /usr/share/lmod/lmod/init/sh
- /usr/share/lmod/lmod/init/csh
- /usr/share/lmod/lmod/init/perl
- /usr/share/lmod/lmod/init/env_modules_python.py
- /usr/share/lmod/lmod/libexec/lmod perl
- module
- module
- /usr/share/lmod/lmod/libexec/lmod python
-
-
-
- PrgEnv-cray PrgEnv-cray/8.3.3
- cce cce/14.0.0
-
-
-
-
- PrgEnv-cray PrgEnv-amd/8.3.3
- amd amd/5.1.0
-
-
-
-
- PrgEnv-cray PrgEnv-gnu/8.3.3
-
-
- cray-mpich/8.1.12
- cray-python/3.9.4.2
- subversion/1.14.0
- git/2.31.1
- cmake/3.21.3
- zlib/1.2.11
- cray-libsci/21.08.1.2
- cray-hdf5-parallel/1.12.1.1
- cray-netcdf-hdf5parallel/4.8.1.1
- cray-parallel-netcdf/1.12.1.7
-
-
-
- $CIME_OUTPUT_ROOT/$CASE/run
- $CIME_OUTPUT_ROOT/$CASE/bld
- 0.1
-
- $ENV{NETCDF_DIR}
- $ENV{PNETCDF_DIR}
-
-
-
- $ENV{CRAY_LIBSCI_DIR}/amd/4.0/x86_64/lib:$ENV{LD_LIBRARY_PATH}
-
-
-
- 0
-
-
-
- 128M
- spread
- threads
-
-
-
-
- Crusher. NCCS moderate-security system that contains similar hardware and software as the upcoming Frontier system at ORNL. 192 AMD EPYC 7A53 64C nodes, 128 hwthreads, 512GB DDR4, 4 MI250X GPUs
- .*crusher.*
- Linux
- crayclang-scream
- mpich
- CLI115
- /lustre/orion/cli133/proj-shared/$ENV{USER}/e3sm_scratch/crusher
- /lustre/orion/cli115/world-shared/e3sm/inputdata
- /lustre/orion/cli115/world-shared/e3sm/inputdata/atm/datm7
- $CIME_OUTPUT_ROOT/archive/$CASE
- /lustre/orion/cli133/world-shared/e3sm/baselines/$COMPILER
- /lustre/orion/cli115/world-shared/e3sm/tools/cprnc/cprnc
- 8
- 1
- slurm
- e3sm
- 64
- 8
- TRUE
-
-
- srun
-
- -l -K -n {{ total_tasks }} -N {{ num_nodes }}
-
-
- --gpus-per-node=8 --gpu-bind=closest
- -c $ENV{OMP_NUM_THREADS}
-
-
-
-
-
-
- /usr/share/lmod/lmod/init/sh
- /usr/share/lmod/lmod/init/csh
- /usr/share/lmod/lmod/init/perl
- /usr/share/lmod/lmod/init/env_modules_python.py
- /usr/share/lmod/lmod/libexec/lmod perl
- module
- module
- /usr/share/lmod/lmod/libexec/lmod python
-
-
- PrgEnv-cray
-
- craype-accel-amd-gfx90a
- rocm/5.1.0
-
- cce/14.0.3
-
-
- cray-python/3.9.4.2
- subversion/1.14.0
- git/2.31.1
- cmake/3.21.3
- zlib/1.2.11
- cray-hdf5-parallel/1.12.2.1
- cray-netcdf-hdf5parallel/4.9.0.1
- cray-parallel-netcdf/1.12.3.1
-
-
-
- $CIME_OUTPUT_ROOT/$CASE/run
- $CIME_OUTPUT_ROOT/$CASE/bld
- 0.1
- 0
-
- $ENV{NETCDF_DIR}
- $ENV{PNETCDF_DIR}
- 0
-
- 1
- romio_cb_read=disable
-
-
-
- 128M
- spread
- threads
-
-
-
Frontier. AMD EPYC 7A53 64C nodes, 128 hwthreads, 512GB DDR4, 4 MI250X GPUs.
.*frontier.*
CNL
- crayclang-scream
+ craygnuamdgpu,crayclang-scream
mpich
cli115
/lustre/orion/proj-shared/cli115
@@ -1451,17 +1190,34 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
module
module
/usr/share/lmod/lmod/libexec/lmod python
+
+
+
+ PrgEnv-gnu
+ cpe/24.07
+ libfabric/1.15.2.0
+ craype-accel-amd-gfx90a
+ rocm/6.2.0
+ libunwind
+ cray-python
+ subversion
+ git
+ cmake
+ cray-hdf5-parallel
+ cray-netcdf-hdf5parallel
+ cray-parallel-netcdf
+ darshan-runtime
+
- PrgEnv-cray
+ cpe/22.12
craype-accel-amd-gfx90a
rocm/5.4.0
libunwind/1.6.2
-
-
cce/15.0.1
- craype craype/2.7.20
- cray-mpich cray-mpich/8.1.26
+ libfabric/1.15.2.0
+ craype/2.7.20
+ cray-mpich/8.1.26
cray-python/3.9.13.1
subversion/1.14.1
git/2.36.1
@@ -1495,9 +1251,13 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
threads
+
+ $SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /lustre/orion/cli115/world-shared/frontier/3rdparty/adios2/2.10/install/craygnuamdgppu/cpe-24.07/libfabric-1.15.2.0; else echo "$ADIOS2_ROOT"; fi}
+
$SHELL{if [ -z "$ADIOS2_ROOT" ]; then echo /lustre/orion/cli115/world-shared/frontier/3rdparty/adios2/2.9.1/cray-mpich-8.1.26/crayclang-scream-14.0.0; else echo "$ADIOS2_ROOT"; fi}
+
@@ -3044,6 +2804,7 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
/lcrc/group/e3sm/soft/improv/pnetcdf/1.12.3/gcc-12.3.0/openmpi-4.1.6
/lcrc/group/e3sm/soft/improv/pnetcdf/1.12.3/gcc-12.3.0/openmpi-4.1.6/bin:/lcrc/group/e3sm/soft/improv/netcdf-fortran/4.6.1b/gcc-12.3.0/openmpi-4.1.6/bin:/lcrc/group/e3sm/soft/improv/netcdf-c/4.9.2b/gcc-12.3.0/openmpi-4.1.6/bin:/lcrc/group/e3sm/soft/improv/openmpi/4.1.6/gcc-12.3.0/bin:/lcrc/group/e3sm/soft/perl/improv/bin:$ENV{PATH}
$SHELL{lp=/lcrc/group/e3sm/soft/improv/netlib-lapack/3.12.0/gcc-12.3.0:/lcrc/group/e3sm/soft/improv/pnetcdf/1.12.3/gcc-12.3.0/openmpi-4.1.6/lib:/lcrc/group/e3sm/soft/improv/netcdf-fortran/4.6.1b/gcc-12.3.0/openmpi-4.1.6/lib:/lcrc/group/e3sm/soft/improv/netcdf-c/4.9.2b/gcc-12.3.0/openmpi-4.1.6/lib:/opt/pbs/lib:/lcrc/group/e3sm/soft/improv/openmpi/4.1.6/gcc-12.3.0/lib; if [ -z "$LD_LIBRARY_PATH" ]; then echo $lp; else echo "$lp:$LD_LIBRARY_PATH"; fi}
+ $SHELL{if [ -z "$MOAB_ROOT" ]; then echo /lcrc/soft/climate/moab/improv/gnu; else echo "$MOAB_ROOT"; fi}
^lockedfile
@@ -3065,9 +2826,9 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
/usr/workspace/e3sm/ccsm3data/inputdata/atm/datm7
/p/lustre2/$USER/archive/$CASE
/p/lustre2/$USER/ccsm_baselines/$COMPILER
- /usr/workspace/e3sm/tools/cprnc
+ /usr/workspace/e3sm/apps/cprnc
8
- lc_slurm
+ slurm
boutte3 -at- llnl.gov
56
56
@@ -3076,8 +2837,16 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
srun
+
+ --mpi=pmi2
+ --export=ALL
+ -n {{ total_tasks }} -N {{ num_nodes }}
+ -c 1
+ --cpu_bind=cores
+ -m plane={{ tasks_per_node }}
+
-
+
/usr/share/lmod/lmod/init/env_modules_python.py
/usr/share/lmod/lmod/init/perl
/usr/share/lmod/lmod/init/sh
@@ -3089,24 +2858,27 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
python/3.9.12
git
+ subversion
+ cmake/3.19.2
mkl/2022.1.0
intel-classic/2021.6.0-magic
- mvapich2/2.3.7
- cmake/3.19.2
- /usr/workspace/e3sm/install/quartz/modulefiles
- hdf5/1.12.2
- netcdf-c/4.9.0
- netcdf-fortran/4.6.0
- parallel-netcdf/1.12.3
- screamML-venv/0.0.1
- subversion
+ /usr/workspace/e3sm/spack/modules/ruby/linux-rhel8-x86_64/Core
+ mvapich2/2.3.7-ll7cmqm
+ hdf5/1.10.7-ewjpbjd
+ netcdf-c/4.4.1.1-vaxofek
+ netcdf-fortran/4.4.4-3pzbx2u
+ parallel-netcdf/1.11.0-tzgdala
$CIME_OUTPUT_ROOT/$CASE/run
$CIME_OUTPUT_ROOT/$CASE/bld
- /usr/workspace/e3sm/install/quartz/netcdf-fortran/
- /usr/tce/packages/parallel-netcdf/parallel-netcdf-1.12.3-mvapich2-2.3.7-intel-classic-2021.6.0
+ 128M
+ FALSE
+ /usr/workspace/e3sm/spack/libs/linux-rhel8-cascadelake/intel-2021.6.0/hdf5-1.10.7-ewjpbjdhjgjzrzjcvwyjyuulaesbsjhg
+ /usr/workspace/e3sm/spack/libs/linux-rhel8-cascadelake/intel-2021.6.0/netcdf-c-4.4.1.1-vaxofekwvnvngh7wptmzkwdb7tkzvesn
+ /usr/workspace/e3sm/spack/libs/linux-rhel8-cascadelake/intel-2021.6.0/netcdf-fortran-4.4.4-3pzbx2unddhladhubaahhhysjmprzqi2
+ /usr/workspace/e3sm/spack/libs/linux-rhel8-cascadelake/intel-2021.6.0/parallel-netcdf-1.11.0-tzgdalakmem7tod6cruhqyeackeix5q5
@@ -3121,9 +2893,9 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
/usr/workspace/e3sm/ccsm3data/inputdata/atm/datm7
/p/lustre2/$USER/archive/$CASE
/p/lustre2/$USER/ccsm_baselines/$COMPILER
- /usr/workspace/e3sm/tools/cprnc
+ /usr/workspace/e3sm/apps/cprnc
8
- lc_slurm
+ slurm
boutte3 -at- llnl.gov
224
112
@@ -3132,8 +2904,16 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
srun
+
+ --mpi=pmi2
+ --export=ALL
+ -n {{ total_tasks }} -N {{ num_nodes }}
+ -c 1
+ --cpu_bind=cores
+ -m plane={{ tasks_per_node }}
+
-
+
/usr/share/lmod/lmod/init/env_modules_python.py
/usr/share/lmod/lmod/init/perl
/usr/share/lmod/lmod/init/sh
@@ -3145,24 +2925,27 @@ commented out until "*** No rule to make target '.../libadios2pio-nm-lib.a'" iss
python/3.9.12
git
+ subversion
mkl/2022.1.0
intel-classic/2021.6.0-magic
- mvapich2/2.3.7
cmake/3.19.2
- /usr/workspace/e3sm/install/quartz/modulefiles
- hdf5/1.12.2
- netcdf-c/4.9.0
- netcdf-fortran/4.6.0
- parallel-netcdf/1.12.3
- screamML-venv/0.0.1
- subversion
+ /usr/workspace/e3sm/spack/modules/dane/linux-rhel8-x86_64/Core
+ mvapich2/2.3.7-27jao34
+ hdf5/1.10.7-766kapa
+ netcdf-c/4.4.1.1-2uznnlw
+ netcdf-fortran/4.4.4-itpstyo
+ parallel-netcdf/1.11.0-26sxm4m
$CIME_OUTPUT_ROOT/$CASE/run
$CIME_OUTPUT_ROOT/$CASE/bld
- /usr/workspace/e3sm/install/quartz/netcdf-fortran/
- /usr/tce/packages/parallel-netcdf/parallel-netcdf-1.12.3-mvapich2-2.3.7-intel-classic-2021.6.0
+ 128M
+ FALSE
+ /usr/workspace/e3sm/spack/libs/linux-rhel8-sapphirerapids/intel-2021.6.0/hdf5-1.10.7-766kapalbrdntu2pcgdgbhg2ch26gsuv
+ /usr/workspace/e3sm/spack/libs/linux-rhel8-sapphirerapids/intel-2021.6.0/netcdf-c-4.4.1.1-2uznnlwgiezxute6iyqzqjrpolokeaib
+ /usr/workspace/e3sm/spack/libs/linux-rhel8-sapphirerapids/intel-2021.6.0/netcdf-fortran-4.4.4-itpstyordbern7vlulmlnt47eeeokzfp
+ /usr/workspace/e3sm/spack/libs/linux-rhel8-sapphirerapids/intel-2021.6.0/parallel-netcdf-1.11.0-26sxm4mormsglmhi24poix7sugbigkck
diff --git a/mache/spack/pm-cpu_gnu_mpich.csh b/mache/spack/pm-cpu_gnu_mpich.csh
index 14e3845f..174ef24f 100644
--- a/mache/spack/pm-cpu_gnu_mpich.csh
+++ b/mache/spack/pm-cpu_gnu_mpich.csh
@@ -1,41 +1,38 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm gcc-native &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm climate-utils &> /dev/null
-module rm cray-libsci &> /dev/null
-module rm matlab &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-gnu/8.5.0
-module load gcc/12.2.0
-module load craype-accel-host
-{% if e3sm_lapack %}
-module load cray-libsci/23.02.1.1
-{% endif %}
-module load craype/2.7.20
-module rm cray-mpich &> /dev/null
-module load libfabric/1.15.2.0
-module load cray-mpich/8.1.25
+module load PrgEnv-gnu/8.5.0 \
+ gcc-native/12.3 \
+ cray-libsci/23.12.5 \
+ craype-accel-host \
+ craype/2.7.30 \
+ libfabric/1.20.1 \
+ cray-mpich/8.1.28 \
+ cmake/3.24.3
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.3
-module load cray-netcdf-hdf5parallel/4.9.0.3
-module load cray-parallel-netcdf/1.12.3.3
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -55,6 +52,7 @@ setenv HDF5_USE_FILE_LOCKING FALSE
## Not needed
# setenv PERL5LIB /global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
setenv FI_CXI_RX_MATCH_MODE software
+setenv FI_MR_CACHE_MONITOR kdreg2
setenv MPICH_COLL_SYNC MPI_Bcast
setenv GATOR_INITIAL_MB 4000MB
setenv BLA_VENDOR Generic
diff --git a/mache/spack/pm-cpu_gnu_mpich.sh b/mache/spack/pm-cpu_gnu_mpich.sh
index 75fb3870..b824d419 100644
--- a/mache/spack/pm-cpu_gnu_mpich.sh
+++ b/mache/spack/pm-cpu_gnu_mpich.sh
@@ -1,41 +1,38 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm gcc-native &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm climate-utils &> /dev/null
-module rm cray-libsci &> /dev/null
-module rm matlab &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-gnu/8.5.0
-module load gcc/12.2.0
-module load craype-accel-host
-{% if e3sm_lapack %}
-module load cray-libsci/23.02.1.1
-{% endif %}
-module load craype/2.7.20
-module rm cray-mpich &> /dev/null
-module load libfabric/1.15.2.0
-module load cray-mpich/8.1.25
+module load PrgEnv-gnu/8.5.0 \
+ gcc-native/12.3 \
+ cray-libsci/23.12.5 \
+ craype-accel-host \
+ craype/2.7.30 \
+ libfabric/1.20.1 \
+ cray-mpich/8.1.28 \
+ cmake/3.24.3
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.3
-module load cray-netcdf-hdf5parallel/4.9.0.3
-module load cray-parallel-netcdf/1.12.3.3
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -55,6 +52,7 @@ export HDF5_USE_FILE_LOCKING=FALSE
## Not needed
# export PERL5LIB=/global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
export FI_CXI_RX_MATCH_MODE=software
+export FI_MR_CACHE_MONITOR=kdreg2
if [ -z "${NERSC_HOST:-}" ]; then
# happens when building spack environment
diff --git a/mache/spack/pm-cpu_gnu_mpich.yaml b/mache/spack/pm-cpu_gnu_mpich.yaml
index 1a8b5d6d..7fd22e6f 100644
--- a/mache/spack/pm-cpu_gnu_mpich.yaml
+++ b/mache/spack/pm-cpu_gnu_mpich.yaml
@@ -2,9 +2,7 @@ spack:
specs:
- gcc
- cray-mpich
-{% if e3sm_lapack %}
- cray-libsci
-{% endif %}
{% if e3sm_hdf5_netcdf %}
- hdf5
- netcdf-c
@@ -16,12 +14,10 @@ spack:
unify: when_possible
packages:
all:
- compiler: [gcc@12.2.0]
+ compiler: [gcc@12.3]
providers:
- mpi: [cray-mpich@8.1.25]
-{% if e3sm_lapack %}
- lapack: [cray-libsci@23.02.1.1]
-{% endif %}
+ mpi: [cray-mpich@8.1.28]
+ lapack: [cray-libsci@23.12.5]
bzip2:
externals:
- spec: bzip2@1.0.6
@@ -101,65 +97,55 @@ spack:
buildable: false
gcc:
externals:
- - spec: gcc@12.2.0
+ - spec: gcc@12.3
modules:
- PrgEnv-gnu/8.5.0
- - gcc/12.2.0
+ - gcc-native/12.3
+ - cray-libsci/23.12.5
- craype-accel-host
- - craype/2.7.20
- - libfabric/1.15.2.0
+ - craype/2.7.30
+ - libfabric/1.20.1
buildable: false
cray-mpich:
externals:
- - spec: cray-mpich@8.1.25
- prefix: /opt/cray/pe/mpich/8.1.25/ofi/gnu/9.1
- modules:
- - libfabric/1.15.2.0
- - cray-mpich/8.1.25
- buildable: false
- libfabric:
- externals:
- - spec: libfabric@1.15.2.0
- prefix: /opt/cray/libfabric/1.15.2.0
+ - spec: cray-mpich@8.1.28
modules:
- - libfabric/1.15.2.0
+ - libfabric/1.20.1
+ - cray-mpich/8.1.28
buildable: false
-{% if e3sm_lapack %}
cray-libsci:
externals:
- - spec: cray-libsci@23.02.1.1
- prefix: /opt/cray/pe/libsci/23.02.1.1/GNU/9.1/x86_64
+ - spec: cray-libsci@23.12.5
modules:
- - cray-libsci/23.02.1.1
+ - cray-libsci/23.12.5
buildable: false
-{% endif %}
{% if e3sm_hdf5_netcdf %}
hdf5:
externals:
- - spec: hdf5@1.12.2.3~cxx+fortran+hl~java+mpi+shared
- prefix: /opt/cray/pe/hdf5-parallel/1.12.2.3/GNU/9.1
+ - spec: hdf5@1.12.2.9~cxx+fortran+hl~java+mpi+shared
+ prefix: /opt/cray/pe/hdf5-parallel/1.12.2.9/gnu/12.3
buildable: false
parallel-netcdf:
externals:
- - spec: parallel-netcdf@1.12.3.3+cxx+fortran+pic+shared
- prefix: /opt/cray/pe/parallel-netcdf/1.12.3.3/GNU/9.1/
+ - spec: parallel-netcdf@1.12.3.9+cxx+fortran+pic+shared
+ prefix: /opt/cray/pe/parallel-netcdf/1.12.3.9/gnu/12.3
buildable: false
netcdf-c:
externals:
- - spec: netcdf-c@4.9.0.3+mpi~parallel-netcdf
- prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.3/GNU/9.1
+ - spec: netcdf-c@4.9.0.9+mpi~parallel-netcdf
+ prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.9/gnu/12.3
buildable: false
netcdf-fortran:
externals:
- spec: netcdf-fortran@4.5.3
- prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.3/GNU/9.1
+ prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.9/gnu/12.3
buildable: false
{% endif %}
config:
install_missing_compilers: false
compilers:
- compiler:
- spec: gcc@12.2.0
+ spec: gcc@12.3
paths:
cc: cc
cxx: CC
@@ -170,10 +156,11 @@ spack:
target: x86_64
modules:
- PrgEnv-gnu/8.5.0
- - gcc/12.2.0
+ - gcc-native/12.3
+ - cray-libsci/23.12.5
- craype-accel-host
- - craype/2.7.20
- - libfabric/1.15.2.0
+ - craype/2.7.30
+ - libfabric/1.20.1
environment:
prepend_path:
PKG_CONFIG_PATH: "/opt/cray/xpmem/2.6.2-2.5_2.33__gd067c3f.shasta/lib64/pkgconfig"
diff --git a/mache/spack/pm-cpu_intel_mpich.csh b/mache/spack/pm-cpu_intel_mpich.csh
index d6eda3d1..52de4034 100644
--- a/mache/spack/pm-cpu_intel_mpich.csh
+++ b/mache/spack/pm-cpu_intel_mpich.csh
@@ -1,38 +1,36 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm gcc-native &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm climate-utils &> /dev/null
-module rm cray-libsci &> /dev/null
-module rm matlab &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-intel/8.5.0
-module load intel/2023.2.0
-module load craype-accel-host
-module load craype/2.7.30
-module load libfabric/1.15.2.0
-module rm cray-mpich &> /dev/null
-module load cray-mpich/8.1.28
+module load PrgEnv-intel/8.5.0 \
+ intel/2023.2.0 \
+ craype-accel-host \
+ craype/2.7.30 \
+ libfabric/1.20.1 \
+ cray-mpich/8.1.28
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.9
-module load cray-netcdf-hdf5parallel/4.9.0.9
-module load cray-parallel-netcdf/1.12.3.9
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -52,6 +50,7 @@ setenv HDF5_USE_FILE_LOCKING FALSE
## Not needed
# setenv PERL5LIB /global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
setenv FI_CXI_RX_MATCH_MODE software
+setenv FI_MR_CACHE_MONITOR kdreg2
setenv MPICH_COLL_SYNC MPI_Bcast
setenv GATOR_INITIAL_MB 4000MB
setenv BLA_VENDOR Intel10_64_dyn
diff --git a/mache/spack/pm-cpu_intel_mpich.sh b/mache/spack/pm-cpu_intel_mpich.sh
index f997eaca..5d4e3b85 100644
--- a/mache/spack/pm-cpu_intel_mpich.sh
+++ b/mache/spack/pm-cpu_intel_mpich.sh
@@ -1,38 +1,36 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm gcc-native &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm climate-utils &> /dev/null
-module rm cray-libsci &> /dev/null
-module rm matlab &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-intel/8.5.0
-module load intel/2023.2.0
-module load craype-accel-host
-module load craype/2.7.30
-module load libfabric/1.15.2.0
-module rm cray-mpich &> /dev/null
-module load cray-mpich/8.1.28
+module load PrgEnv-intel/8.5.0 \
+ intel/2023.2.0 \
+ craype-accel-host \
+ craype/2.7.30 \
+ libfabric/1.20.1 \
+ cray-mpich/8.1.28
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.9
-module load cray-netcdf-hdf5parallel/4.9.0.9
-module load cray-parallel-netcdf/1.12.3.9
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -52,12 +50,12 @@ export HDF5_USE_FILE_LOCKING=FALSE
## Not needed
# export PERL5LIB=/global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
export FI_CXI_RX_MATCH_MODE=software
+export FI_MR_CACHE_MONITOR=kdreg2
if [ -z "${NERSC_HOST:-}" ]; then
# happens when building spack environment
export NERSC_HOST="perlmutter"
fi
-export FI_CXI_RX_MATCH_MODE=software
export MPICH_COLL_SYNC=MPI_Bcast
export GATOR_INITIAL_MB=4000MB
export BLA_VENDOR=Intel10_64_dyn
diff --git a/mache/spack/pm-cpu_intel_mpich.yaml b/mache/spack/pm-cpu_intel_mpich.yaml
index 97846bdd..0a2d34fc 100644
--- a/mache/spack/pm-cpu_intel_mpich.yaml
+++ b/mache/spack/pm-cpu_intel_mpich.yaml
@@ -101,22 +101,14 @@ spack:
- intel/2023.2.0
- craype-accel-host
- craype/2.7.30
- - libfabric/1.15.2.0
+ - libfabric/1.20.1
buildable: false
cray-mpich:
externals:
- spec: cray-mpich@8.1.28
- prefix: /opt/cray/pe/mpich/8.1.28/ofi/intel/19.0
modules:
- cray-mpich/8.1.28
- - libfabric/1.15.2.0
- buildable: false
- libfabric:
- externals:
- - spec: libfabric@1.15.2.0
- prefix: /opt/cray/libfabric/1.15.2.0
- modules:
- - libfabric/1.15.2.0
+ - libfabric/1.20.1
buildable: false
{% if e3sm_hdf5_netcdf %}
hdf5:
@@ -127,7 +119,7 @@ spack:
parallel-netcdf:
externals:
- spec: parallel-netcdf@1.12.3.9+cxx+fortran+pic+shared
- prefix: /opt/cray/pe/parallel-netcdf/1.12.3.9/intel/19.0/
+ prefix: /opt/cray/pe/parallel-netcdf/1.12.3.9/intel/19.0
buildable: false
netcdf-c:
externals:
@@ -158,7 +150,7 @@ spack:
- intel/2023.2.0
- craype-accel-host
- craype/2.7.30
- - libfabric/1.15.2.0
+ - libfabric/1.20.1
environment:
prepend_path:
PKG_CONFIG_PATH: "/opt/cray/xpmem/2.6.2-2.5_2.33__gd067c3f.shasta/lib64/pkgconfig"
diff --git a/mache/spack/pm-cpu_nvidia_mpich.csh b/mache/spack/pm-cpu_nvidia_mpich.csh
index 87ff8220..6a0f0732 100644
--- a/mache/spack/pm-cpu_nvidia_mpich.csh
+++ b/mache/spack/pm-cpu_nvidia_mpich.csh
@@ -1,42 +1,38 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm gcc-native &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm climate-utils &> /dev/null
-module rm cray-libsci &> /dev/null
-module rm matlab &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-nvidia
-module load nvidia/22.7
-module load craype-x86-milan
-module load libfabric/1.15.2.0
-module load craype-accel-host
-module load craype/2.7.20
-module rm cray-mpich &> /dev/null
-module load cray-mpich/8.1.25
-{% if e3sm_lapack %}
-module load cray-libsci/23.02.1.1
-{% endif %}
+module load PrgEnv-nvidia \
+ nvidia/24.5 \
+ cray-libsci/23.12.5 \
+ craype-accel-host \
+ craype/2.7.30 \
+ libfabric/1.20.1 \
+ cray-mpich/8.1.28 \
+ cmake/3.24.3
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.3
-module load cray-netcdf-hdf5parallel/4.9.0.3
-module load cray-parallel-netcdf/1.12.3.3
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -56,6 +52,8 @@ setenv HDF5_USE_FILE_LOCKING FALSE
## Not needed
# setenv PERL5LIB /global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
setenv MPICH_GPU_SUPPORT_ENABLED 1
+setenv FI_CXI_RX_MATCH_MODE software
+setenv FI_MR_CACHE_MONITOR kdreg2
setenv MPICH_COLL_SYNC MPI_Bcast
setenv GATOR_INITIAL_MB 4000MB
setenv BLA_VENDOR NVHPC
diff --git a/mache/spack/pm-cpu_nvidia_mpich.sh b/mache/spack/pm-cpu_nvidia_mpich.sh
index f28d4d23..90f1d967 100644
--- a/mache/spack/pm-cpu_nvidia_mpich.sh
+++ b/mache/spack/pm-cpu_nvidia_mpich.sh
@@ -1,42 +1,38 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm gcc-native &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm climate-utils &> /dev/null
-module rm cray-libsci &> /dev/null
-module rm matlab &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-nvidia
-module load nvidia/22.7
-module load craype-x86-milan
-module load libfabric/1.15.2.0
-module load craype-accel-host
-module load craype/2.7.20
-module rm cray-mpich &> /dev/null
-module load cray-mpich/8.1.25
-{% if e3sm_lapack %}
-module load cray-libsci/23.02.1.1
-{% endif %}
+module load PrgEnv-nvidia \
+ nvidia/24.5 \
+ cray-libsci/23.12.5 \
+ craype-accel-host \
+ craype/2.7.30 \
+ libfabric/1.20.1 \
+ cray-mpich/8.1.28 \
+ cmake/3.24.3
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.3
-module load cray-netcdf-hdf5parallel/4.9.0.3
-module load cray-parallel-netcdf/1.12.3.3
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -61,6 +57,8 @@ if [ -z "${NERSC_HOST:-}" ]; then
# happens when building spack environment
export NERSC_HOST="perlmutter"
fi
+export FI_CXI_RX_MATCH_MODE=software
+export FI_MR_CACHE_MONITOR=kdreg2
export MPICH_COLL_SYNC=MPI_Bcast
export GATOR_INITIAL_MB=4000MB
export BLA_VENDOR=NVHPC
diff --git a/mache/spack/pm-cpu_nvidia_mpich.yaml b/mache/spack/pm-cpu_nvidia_mpich.yaml
index 52b02d73..92789bee 100644
--- a/mache/spack/pm-cpu_nvidia_mpich.yaml
+++ b/mache/spack/pm-cpu_nvidia_mpich.yaml
@@ -1,9 +1,7 @@
spack:
specs:
- cray-mpich
-{% if e3sm_lapack %}
- cray-libsci
-{% endif %}
{% if e3sm_hdf5_netcdf %}
- hdf5
- netcdf-c
@@ -15,12 +13,10 @@ spack:
unify: when_possible
packages:
all:
- compiler: [nvhpc@22.7]
+ compiler: [nvhpc@24.5]
providers:
- mpi: [cray-mpich@8.1.25]
-{% if e3sm_lapack %}
- lapack: [cray-libsci@23.02.1.1]
-{% endif %}
+ mpi: [cray-mpich@8.1.28]
+ lapack: [cray-libsci@23.12.5]
bzip2:
externals:
- spec: bzip2@1.0.6
@@ -100,67 +96,59 @@ spack:
buildable: false
cray-mpich:
externals:
- - spec: cray-mpich@8.1.25
- prefix: /opt/cray/pe/mpich/8.1.25/ofi/nvidia/20.7
- modules:
- - libfabric/1.15.2.0
- - cray-mpich/8.1.25
- buildable: false
- libfabric:
- externals:
- - spec: libfabric@1.15.2.0
- prefix: /opt/cray/libfabric/1.15.2.0
+ - spec: cray-mpich@8.1.28
modules:
- - libfabric/1.15.2.0
+ - libfabric/1.20.1
+ - cray-mpich/8.1.28
buildable: false
-{% if e3sm_lapack %}
cray-libsci:
externals:
- - spec: cray-libsci@23.02.1.1
- prefix: /opt/cray/pe/libsci/23.02.1.1/NVIDIA/20.7/x86_64
+ - spec: cray-libsci@23.12.5
+ module:
+ - cray-libsci/23.12.5
buildable: false
-{% endif %}
{% if e3sm_hdf5_netcdf %}
hdf5:
externals:
- - spec: hdf5@1.12.2.3~cxx+fortran+hl~java+mpi+shared
- prefix: /opt/cray/pe/hdf5-parallel/1.12.2.3/nvidia/20.7
+ - spec: hdf5@1.12.2.9~cxx+fortran+hl~java+mpi+shared
+ prefix: /opt/cray/pe/hdf5-parallel/1.12.2.9/nvidia/23.3
buildable: false
parallel-netcdf:
externals:
- - spec: parallel-netcdf@1.12.3.3+cxx+fortran+pic+shared
- prefix: /opt/cray/pe/parallel-netcdf/1.12.3.3/nvidia/20.7
+ - spec: parallel-netcdf@1.12.3.9+cxx+fortran+pic+shared
+ prefix: /opt/cray/pe/parallel-netcdf/1.12.3.9/nvidia/23.3
buildable: false
netcdf-c:
externals:
- - spec: netcdf-c@4.9.0.3+mpi~parallel-netcdf
- prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.3/nvidia/20.7
+ - spec: netcdf-c@4.9.0.9+mpi~parallel-netcdf
+ prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.9/nvidia/23.3
buildable: false
netcdf-fortran:
externals:
- spec: netcdf-fortran@4.5.3
- prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.3/nvidia/20.7
+ prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.9/nvidia/23.3
buildable: false
{% endif %}
config:
install_missing_compilers: false
compilers:
- compiler:
- spec: nvhpc@22.7
+ spec: nvhpc@24.5
paths:
- cc: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/compilers/bin/nvc
- cxx: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/compilers/bin/nvc++
- f77: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/compilers/bin/nvfortran
- fc: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/compilers/bin/nvfortran
+ cc: /opt/nvidia/hpc_sdk/Linux_x86_64/24.5/compilers/bin/nvc
+ cxx: /opt/nvidia/hpc_sdk/Linux_x86_64/24.5/compilers/bin/nvc++
+ f77: /opt/nvidia/hpc_sdk/Linux_x86_64/24.5/compilers/bin/nvfortran
+ fc: /opt/nvidia/hpc_sdk/Linux_x86_64/24.5/compilers/bin/nvfortran
flags: {}
operating_system: sles15
target: any
modules:
- PrgEnv-nvidia
- - nvidia/22.7
- - craype-x86-milan
- - libfabric
+ - nvidia/24.5
+ - cray-libsci/23.12.5
- craype-accel-host
+ - craype/2.7.30
+ - libfabric/1.20
environment:
prepend_path:
PKG_CONFIG_PATH: "/opt/cray/xpmem/2.6.2-2.5_2.33__gd067c3f.shasta/lib64/pkgconfig"
diff --git a/mache/spack/pm-gpu_gnugpu_mpich.csh b/mache/spack/pm-gpu_gnugpu_mpich.csh
index 53e03d55..b13ef5b3 100644
--- a/mache/spack/pm-gpu_gnugpu_mpich.csh
+++ b/mache/spack/pm-gpu_gnugpu_mpich.csh
@@ -1,41 +1,39 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm climate-utils &> /dev/null
-module rm matlab &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-gnu/8.3.3
-module load gcc/11.2.0
-module load craype-x86-milan
-module load libfabric/1.15.2.0
-module load cudatoolkit/11.7
-module load craype-accel-nvidia80
-module load craype/2.7.20
-module rm cray-mpich &> /dev/null
-module load cray-mpich/8.1.25
-{% if e3sm_lapack %}
-module load cray-libsci/23.02.1.1
-{% endif %}
+module load PrgEnv-gnu/8.5.0 \
+ gcc-native/12.3 \
+ cudatoolkit/12.4 \
+ craype-accel-nvidia80 \
+ cray-libsci/23.12.5 \
+ libfabric/1.20.1 \
+ craype/2.7.30 \
+ cray-mpich/8.1.28 \
+ cmake/3.24.3
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.3
-module load cray-netcdf-hdf5parallel/4.9.0.3
-module load cray-parallel-netcdf/1.12.3.3
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -54,4 +52,6 @@ setenv MPICH_MPIIO_DVS_MAXNODES 1
setenv HDF5_USE_FILE_LOCKING FALSE
## Not needed
# setenv PERL5LIB /global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
+setenv MPICH_COLL_SYNC MPI_Bcast
+setenv FI_MR_CACHE_MONITOR kdreg2
setenv MPICH_GPU_SUPPORT_ENABLED 1
diff --git a/mache/spack/pm-gpu_gnugpu_mpich.sh b/mache/spack/pm-gpu_gnugpu_mpich.sh
index 3ce26746..009ffd41 100644
--- a/mache/spack/pm-gpu_gnugpu_mpich.sh
+++ b/mache/spack/pm-gpu_gnugpu_mpich.sh
@@ -1,41 +1,39 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm climate-utils &> /dev/null
-module rm matlab &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-gnu/8.3.3
-module load gcc/11.2.0
-module load craype-x86-milan
-module load libfabric/1.15.2.0
-module load cudatoolkit/11.7
-module load craype-accel-nvidia80
-module load craype/2.7.20
-module rm cray-mpich &> /dev/null
-module load cray-mpich/8.1.25
-{% if e3sm_lapack %}
-module load cray-libsci/23.02.1.1
-{% endif %}
+module load PrgEnv-gnu/8.5.0 \
+ gcc-native/12.3 \
+ cudatoolkit/12.4 \
+ craype-accel-nvidia80 \
+ cray-libsci/23.12.5 \
+ libfabric/1.20.1 \
+ craype/2.7.30 \
+ cray-mpich/8.1.28 \
+ cmake/3.24.3
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.3
-module load cray-netcdf-hdf5parallel/4.9.0.3
-module load cray-parallel-netcdf/1.12.3.3
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -54,6 +52,8 @@ export MPICH_VERSION_DISPLAY=1
export HDF5_USE_FILE_LOCKING=FALSE
## Not needed
# export PERL5LIB=/global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
+export MPICH_COLL_SYNC=MPI_Bcast
+export FI_MR_CACHE_MONITOR=kdreg2
export MPICH_GPU_SUPPORT_ENABLED=1
if [ -z "${NERSC_HOST:-}" ]; then
diff --git a/mache/spack/pm-gpu_gnugpu_mpich.yaml b/mache/spack/pm-gpu_gnugpu_mpich.yaml
index 985ceddb..0f18d918 100644
--- a/mache/spack/pm-gpu_gnugpu_mpich.yaml
+++ b/mache/spack/pm-gpu_gnugpu_mpich.yaml
@@ -2,9 +2,7 @@ spack:
specs:
- gcc
- cray-mpich
-{% if e3sm_lapack %}
- cray-libsci
-{% endif %}
{% if e3sm_hdf5_netcdf %}
- hdf5
- netcdf-c
@@ -16,12 +14,10 @@ spack:
unify: when_possible
packages:
all:
- compiler: [gcc@11.2.0]
+ compiler: [gcc@12.3]
providers:
- mpi: [cray-mpich@8.1.24]
-{% if e3sm_lapack %}
- lapack: [cray-libsci@23.02.1.1]
-{% endif %}
+ mpi: [cray-mpich@8.1.28]
+ lapack: [cray-libsci@23.12.5]
bzip2:
externals:
- spec: bzip2@1.0.6
@@ -101,78 +97,66 @@ spack:
buildable: false
gcc:
externals:
- - spec: gcc@11.2.0
+ - spec: gcc@12.3
modules:
- - PrgEnv-gnu/8.3.3
- - gcc/11.2.0
- - cudatoolkit/11.7
+ - PrgEnv-gnu/8.5.0
+ - gcc-native/12.3
- craype-accel-nvidia80
- - craype/2.7.19
- - libfabric/1.15.2.0
+ - cray-libsci/23.12.5
+ - libfabric/1.20.1
+ - craype/2.7.30
+ - cudatoolkit/12.4
buildable: false
cuda:
externals:
- - spec: cuda@11.7
- prefix: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/cuda/11.7
+ - spec: cuda@12.4
modules:
- - PrgEnv-gnu/8.3.3
- - gcc/11.2.0
- - cudatoolkit/11.7
+ - PrgEnv-gnu/8.5.0
+ - gcc-native/12.3
- craype-accel-nvidia80
- - craype/2.7.19
- - libfabric/1.15.2.0
+ - cray-libsci/23.12.5
+ - libfabric/1.20.1
+ - craype/2.7.30
+ - cudatoolkit/12.4
buildable: false
cray-mpich:
externals:
- - spec: cray-mpich@8.1.25
- prefix: /opt/cray/pe/mpich/8.1.25/ofi/gnu/9.1
- modules:
- - libfabric/1.15.2.0
- - cray-mpich/8.1.25
+ - spec: cray-mpich@8.1.28
+ prefix: /opt/cray/pe/mpich/8.1.28/ofi/gnu/12.3
buildable: false
- libfabric:
- externals:
- - spec: libfabric@1.15.2.0
- prefix: /opt/cray/libfabric/1.15.2.0
- modules:
- - libfabric/1.15.2.0
- buildable: false
-{% if e3sm_lapack %}
cray-libsci:
externals:
- - spec: cray-libsci@23.02.1.1
- prefix: /opt/cray/pe/libsci/23.02.1.1/GNU/9.1/x86_64
+ - spec: cray-libsci@23.12.5
modules:
- - cray-libsci/23.02.1.1
+ - cray-libsci/23.12.5
buildable: false
-{% endif %}
{% if e3sm_hdf5_netcdf %}
hdf5:
externals:
- - spec: hdf5@1.12.2.3~cxx+fortran+hl~java+mpi+shared
- prefix: /opt/cray/pe/hdf5-parallel/1.12.2.3/GNU/9.1
+ - spec: hdf5@1.12.2.9~cxx+fortran+hl~java+mpi+shared
+ prefix: /opt/cray/pe/hdf5-parallel/1.12.2.9/gnu/12.3
buildable: false
parallel-netcdf:
externals:
- - spec: parallel-netcdf@1.12.3.3+cxx+fortran+pic+shared
- prefix: /opt/cray/pe/parallel-netcdf/1.12.3.3/GNU/9.1/
+ - spec: parallel-netcdf@1.12.3.9+cxx+fortran+pic+shared
+ prefix: /opt/cray/pe/parallel-netcdf/1.12.3.9/gnu/12.3
buildable: false
netcdf-c:
externals:
- - spec: netcdf-c@4.9.0.3+mpi~parallel-netcdf
- prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.3/GNU/9.1
+ - spec: netcdf-c@4.9.0.9+mpi~parallel-netcdf
+ prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.9/gnu/12.3
buildable: false
netcdf-fortran:
externals:
- spec: netcdf-fortran@4.5.3
- prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.3/GNU/9.1
+ prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.9/gnu/12.3
buildable: false
{% endif %}
config:
install_missing_compilers: false
compilers:
- compiler:
- spec: gcc@11.2.0
+ spec: gcc@12.3
paths:
cc: cc
cxx: CC
@@ -182,12 +166,13 @@ spack:
operating_system: sles15
target: any
modules:
- - PrgEnv-gnu/8.3.3
- - gcc/11.2.0
- - cudatoolkit/11.7
+ - PrgEnv-gnu/8.5.0
+ - gcc-native/12.3
- craype-accel-nvidia80
- - craype/2.7.20
- - libfabric/1.15.2.0
+ - cray-libsci/23.12.5
+ - libfabric/1.20.1
+ - craype/2.7.30
+ - cudatoolkit/12.4
environment:
prepend_path:
PKG_CONFIG_PATH: "/opt/cray/xpmem/2.6.2-2.5_2.33__gd067c3f.shasta/lib64/pkgconfig"
diff --git a/mache/spack/pm-gpu_nvidiagpu_mpich.csh b/mache/spack/pm-gpu_nvidiagpu_mpich.csh
index 5b474a81..4aca5458 100644
--- a/mache/spack/pm-gpu_nvidiagpu_mpich.csh
+++ b/mache/spack/pm-gpu_nvidiagpu_mpich.csh
@@ -1,42 +1,40 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm climate-utils &> /dev/null
-module rm matlab &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-nvidia
-module load nvidia/22.7
-module load craype-x86-milan
-module load libfabric/1.15.2.0
-module load cudatoolkit/11.7
-module load craype-accel-nvidia80
-module load gcc-mixed/11.2.0
-module load craype/2.7.20
-module rm cray-mpich &> /dev/null
-module load cray-mpich/8.1.25
-{% if e3sm_lapack %}
-module load cray-libsci/23.02.1.1
-{% endif %}
+module load PrgEnv-nvidia \
+ nvidia/24.5 \
+ cudatoolkit/12.4 \
+ craype-accel-nvidia80 \
+ gcc-native-mixed/12.3 \
+ cray-libsci/23.12.5 \
+ libfabric/1.20.1 \
+ craype/2.7.30 \
+ cray-mpich/8.1.28 \
+ cmake/3.24.3
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.3
-module load cray-netcdf-hdf5parallel/4.9.0.3
-module load cray-parallel-netcdf/1.12.3.3
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -53,6 +51,8 @@ setenv MPICH_MPIIO_DVS_MAXNODES 1
# setenv OMP_PROC_BIND spread
# setenv OMP_PLACES threads
setenv HDF5_USE_FILE_LOCKING FALSE
+setenv MPICH_COLL_SYNC MPI_Bcast
+setenv FI_MR_CACHE_MONITOR kdreg2
## Not needed
# setenv PERL5LIB /global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
setenv MPICH_GPU_SUPPORT_ENABLED 1
diff --git a/mache/spack/pm-gpu_nvidiagpu_mpich.sh b/mache/spack/pm-gpu_nvidiagpu_mpich.sh
index ae949ff8..0b88e212 100644
--- a/mache/spack/pm-gpu_nvidiagpu_mpich.sh
+++ b/mache/spack/pm-gpu_nvidiagpu_mpich.sh
@@ -1,42 +1,40 @@
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module rm PrgEnv-gnu &> /dev/null
-module rm PrgEnv-intel &> /dev/null
-module rm PrgEnv-nvidia &> /dev/null
-module rm PrgEnv-cray &> /dev/null
-module rm PrgEnv-aocc &> /dev/null
-module rm intel &> /dev/null
-module rm intel-oneapi &> /dev/null
-module rm cudatoolkit &> /dev/null
-module rm climate-utils &> /dev/null
-module rm matlab &> /dev/null
-module rm craype-accel-nvidia80 &> /dev/null
-module rm craype-accel-host &> /dev/null
-module rm perftools-base &> /dev/null
-module rm perftools &> /dev/null
-module rm darshan &> /dev/null
+module rm cpe \
+ cray-hdf5-parallel \
+ cray-netcdf-hdf5parallel \
+ cray-parallel-netcdf \
+ PrgEnv-gnu \
+ PrgEnv-intel \
+ PrgEnv-nvidia \
+ PrgEnv-cray \
+ PrgEnv-aocc \
+ gcc-native \
+ intel \
+ intel-oneapi \
+ cudatoolkit \
+ climate-utils \
+ cray-libsci \
+ matlab \
+ craype-accel-nvidia80 \
+ craype-accel-host \
+ perftools-base \
+ perftools \
+ darshan \
+ cray-mpich &> /dev/null
-module load PrgEnv-nvidia
-module load nvidia/22.7
-module load craype-x86-milan
-module load libfabric/1.15.2.0
-module load cudatoolkit/11.7
-module load craype-accel-nvidia80
-module load gcc-mixed/11.2.0
-module load craype/2.7.20
-module rm cray-mpich &> /dev/null
-module load cray-mpich/8.1.25
-{% if e3sm_lapack %}
-module load cray-libsci/23.02.1.1
-{% endif %}
+module load PrgEnv-nvidia \
+ nvidia/24.5 \
+ cudatoolkit/12.4 \
+ craype-accel-nvidia80 \
+ gcc-native-mixed/12.3 \
+ cray-libsci/23.12.5 \
+ libfabric/1.20.1 \
+ craype/2.7.30 \
+ cray-mpich/8.1.28 \
+ cmake/3.24.3
{% if e3sm_hdf5_netcdf %}
-module rm cray-hdf5-parallel &> /dev/null
-module rm cray-netcdf-hdf5parallel &> /dev/null
-module rm cray-parallel-netcdf &> /dev/null
-module load cray-hdf5-parallel/1.12.2.3
-module load cray-netcdf-hdf5parallel/4.9.0.3
-module load cray-parallel-netcdf/1.12.3.3
+module load cray-hdf5-parallel/1.12.2.9 \
+ cray-netcdf-hdf5parallel/4.9.0.9 \
+ cray-parallel-netcdf/1.12.3.9
{% endif %}
{% if e3sm_hdf5_netcdf %}
@@ -55,6 +53,8 @@ export MPICH_MPIIO_DVS_MAXNODES=1
export HDF5_USE_FILE_LOCKING=FALSE
## Not needed
# export PERL5LIB=/global/cfs/cdirs/e3sm/perl/lib/perl5-only-switch
+export MPICH_COLL_SYNC=MPI_Bcast
+export FI_MR_CACHE_MONITOR=kdreg2
export MPICH_GPU_SUPPORT_ENABLED=1
if [ -z "${NERSC_HOST:-}" ]; then
diff --git a/mache/spack/pm-gpu_nvidiagpu_mpich.yaml b/mache/spack/pm-gpu_nvidiagpu_mpich.yaml
index 5c1338df..863652f5 100644
--- a/mache/spack/pm-gpu_nvidiagpu_mpich.yaml
+++ b/mache/spack/pm-gpu_nvidiagpu_mpich.yaml
@@ -1,9 +1,7 @@
spack:
specs:
- cray-mpich
-{% if e3sm_lapack %}
- cray-libsci
-{% endif %}
{% if e3sm_hdf5_netcdf %}
- hdf5
- netcdf-c
@@ -15,12 +13,10 @@ spack:
unify: when_possible
packages:
all:
- compiler: [nvhpc@22.7]
+ compiler: [nvhpc@24.5]
providers:
- mpi: [cray-mpich@8.1.25]
-{% if e3sm_lapack %}
- lapack: [cray-libsci@23.02.1.1]
-{% endif %}
+ mpi: [cray-mpich@8.1.28]
+ lapack: [cray-libsci@23.12.5]
bzip2:
externals:
- spec: bzip2@1.0.6
@@ -100,84 +96,72 @@ spack:
buildable: false
cuda:
externals:
- - spec: cuda@11.7
- prefix: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/cuda/11.7
+ - spec: cuda@12.4
modules:
- PrgEnv-nvidia
- - nvidia/22.7
- - cudatoolkit/11.7
+ - nvidia/24.5
- craype-accel-nvidia80
- - gcc-mixed/11.2.0
- - craype-x86-milan
- - libfabric
+ - cray-libsci/23.12.5
+ - libfabric/1.20.1
+ - craype/2.7.30
+ - cudatoolkit/12.4
buildable: false
cray-mpich:
externals:
- - spec: cray-mpich@8.1.25
- prefix: /opt/cray/pe/mpich/8.1.25/ofi/nvidia/20.7
- modules:
- - libfabric/1.15.2.0
- - cray-mpich/8.1.25
- buildable: false
- libfabric:
- externals:
- - spec: libfabric@1.15.2.0
- prefix: /opt/cray/libfabric/1.15.2.0
+ - spec: cray-mpich@8.1.28
modules:
- - libfabric/1.15.2.0
+ - libfabric/1.20.1
+ - cray-mpich/8.1.28
buildable: false
-{% if e3sm_lapack %}
cray-libsci:
externals:
- - spec: cray-libsci@23.02.1.1
- prefix: /opt/cray/pe/libsci/23.02.1.1/NVIDIA/20.7/x86_64
+ - spec: cray-libsci@23.12.5
modules:
- - cray-libsci/23.02.1.1
+ - cray-libsci/23.12.5
buildable: false
-{% endif %}
{% if e3sm_hdf5_netcdf %}
hdf5:
externals:
- - spec: hdf5@1.12.2.3~cxx+fortran+hl~java+mpi+shared
- prefix: /opt/cray/pe/hdf5-parallel/1.12.2.3/nvidia/20.7
+ - spec: hdf5@1.12.2.9~cxx+fortran+hl~java+mpi+shared
+ prefix: /opt/cray/pe/hdf5-parallel/1.12.2.9/nvidia/23.3
buildable: false
parallel-netcdf:
externals:
- - spec: parallel-netcdf@1.12.3.3+cxx+fortran+pic+shared
- prefix: /opt/cray/pe/parallel-netcdf/1.12.3.3/nvidia/20.7
+ - spec: parallel-netcdf@1.12.3.9+cxx+fortran+pic+shared
+ prefix: /opt/cray/pe/parallel-netcdf/1.12.3.9/nvidia/23.3
buildable: false
netcdf-c:
externals:
- - spec: netcdf-c@4.9.0.3+mpi~parallel-netcdf
- prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.3/nvidia/20.7
+ - spec: netcdf-c@4.9.0.9+mpi~parallel-netcdf
+ prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.9/nvidia/23.3
buildable: false
netcdf-fortran:
externals:
- spec: netcdf-fortran@4.5.3
- prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.3/nvidia/20.7
+ prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.9/nvidia/23.3
buildable: false
{% endif %}
config:
install_missing_compilers: false
compilers:
- compiler:
- spec: nvhpc@22.7
+ spec: nvhpc@24.5
paths:
- cc: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/compilers/bin/nvc
- cxx: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/compilers/bin/nvc++
- f77: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/compilers/bin/nvfortran
- fc: /opt/nvidia/hpc_sdk/Linux_x86_64/22.7/compilers/bin/nvfortran
+ cc: /opt/nvidia/hpc_sdk/Linux_x86_64/24.5/compilers/bin/nvc
+ cxx: /opt/nvidia/hpc_sdk/Linux_x86_64/24.5/compilers/bin/nvc++
+ f77: /opt/nvidia/hpc_sdk/Linux_x86_64/24.5/compilers/bin/nvfortran
+ fc: /opt/nvidia/hpc_sdk/Linux_x86_64/24.5/compilers/bin/nvfortran
flags: {}
operating_system: sles15
target: any
modules:
- PrgEnv-nvidia
- - nvidia/22.7
- - cudatoolkit/11.7
+ - nvidia/24.5
- craype-accel-nvidia80
- - gcc-mixed/11.2.0
- - craype-x86-milan
- - libfabric
+ - cray-libsci/23.12.5
+ - libfabric/1.20.1
+ - craype/2.7.30
+ - cudatoolkit/12.4
environment:
prepend_path:
PKG_CONFIG_PATH: "/opt/cray/xpmem/2.6.2-2.5_2.33__gd067c3f.shasta/lib64/pkgconfig"