From 7b7b74b7f8f9920a3adbedbdeabf4a2e3bbd1c61 Mon Sep 17 00:00:00 2001 From: Dinindu Senanayake Date: Fri, 19 Jun 2020 07:42:01 +1200 Subject: [PATCH] add VirSorter-1.0.6-gimkl-2020a-Perl-5.30.1 --- ...irSorter-1.0.6-gimkl-2020a-Perl-5.30.1.eb | 50 +++++++++++++++++++ 1 file changed, 50 insertions(+) create mode 100644 easybuild/easyconfigs/v/VirSorter/VirSorter-1.0.6-gimkl-2020a-Perl-5.30.1.eb diff --git a/easybuild/easyconfigs/v/VirSorter/VirSorter-1.0.6-gimkl-2020a-Perl-5.30.1.eb b/easybuild/easyconfigs/v/VirSorter/VirSorter-1.0.6-gimkl-2020a-Perl-5.30.1.eb new file mode 100644 index 00000000000..8b204f036fe --- /dev/null +++ b/easybuild/easyconfigs/v/VirSorter/VirSorter-1.0.6-gimkl-2020a-Perl-5.30.1.eb @@ -0,0 +1,50 @@ +easyblock = 'Tarball' + +name = 'VirSorter' +version = '1.0.6' +versionsuffix = '-Perl-%(perlver)s' + +homepage = 'https://github.com/simroux/VirSorter' +description = """VirSorter: mining viral signal from microbial genomic data.""" + +toolchain = {'name': 'gimkl', 'version': '2020a'} + +source_urls = ['https://github.com/simroux/%(name)s/archive/'] +sources = ['v%(version)s.tar.gz'] + +dependencies = [ + ('Perl', '5.30.1','',('GCC','9.2.0')), + ('HMMER', '3.3','',('GCC','9.2.0')), + ('MCL', '14.137'), + ('MetaGeneAnnotator', '20080819', '-x86-64', True), + ('MUSCLE', '3.8.31','',SYSTEM), + ('BLAST', '2.10.0', '', ('GCC','9.2.0')), +] + + +exts_defaultclass = 'PerlModule' + + + +exts_list = [ + ('Role::Tiny', '2.001004', { + 'source_tmpl':'Role-Tiny-%(version)s.tar.gz', + 'source_urls':['https://cpan.metacpan.org/authors/id/H/HA/HAARG/'], + 'checksums':['92ba5712850a74102c93c942eb6e7f62f7a4f8f483734ed289d08b324c281687'], + }), +] + + +modextrapaths = { + 'PATH': ['', 'Scripts'], + 'PERL5LIB': ['lib/perl5/site_perl/%(perlver)s/'], +} + +sanity_check_paths = { + 'files': ['wrapper_phage_contigs_sorter_iPlant.pl'], + 'dirs': ['Scripts','lib/perl5/site_perl/%(perlver)s'], +} + +modaliases = {'%(namelower)s': 'wrapper_phage_contigs_sorter_iPlant.pl'} + +moduleclass = 'bio'