Spike Sorting Pipeline

Jupyter notebook to analyze and sort spike based on their morphology recorded via microneurography

Setup Instructions

1. Clone the repository or download the ZIP file.
2. Navigate to the project directory.
3. Create a virtual environment:

   python -m venv spike_sorting_pipeline

4. Activate the virtual environment: On windows

   venv\Scripts\activate

   On macOS/Linux

   source venv/bin/activate

5. Install the required packages:

   pip install -r requirements.txt

6. Open the Jupyter notebook:

   jupyter notebook

Results and Further Reading

The results generated by this code are discussed in detail in our preprint with the title Action Potential Features: Computation and Spike Sorting of Human C-Nociceptor Action Potentials as obtained via Microneurography Recordings. You can access the preprint via the following link:

[Preprint Coming Soon]

For a comprehensive understanding of the methods and results, please refer to the preprint.

Contact

If you have any questions, issues, or suggestions regarding this project, please feel free to contact me at:

Alina Troglio Email: [email protected]