diff --git a/.github/Architecture.md b/.github/Architecture.md index 3ce72670c..0217372e0 100644 --- a/.github/Architecture.md +++ b/.github/Architecture.md @@ -4,220 +4,220 @@ ``` 📦 backend +| |- 📂 dl: +| | |- 📜 dl_model_parser.py : parse the user specified pytorch model +| | |- 📜 dl_trainer.py : train a deep learning model on the dataset +| | |- 📜 detection.py +| | |- 📜 dl_eval.py : Evaluation functions for deep learning models in Pytorch (eg: accuracy, loss, etc) +| | |- 📜 dl_model.py : torch model based on user specifications from drag and drop +| | |- 📜 __init__.py | |- 📂 aws_helpers: | | |- 📂 dynamo_db_utils: -| | | |- 📜 trainspace_db.py -| | | |- 📜 constants.py : list of helpful constants | | | |- 📜 userprogress_db.py | | | |- 📜 DynamoUnitTests.md | | | |- 📜 dynamo_db_utils.py +| | | |- 📜 constants.py : list of helpful constants +| | | |- 📜 trainspace_db.py | | |- 📜 __init__.py | |- 📂 ml: | | |- 📜 ml_model_parser.py -| | |- 📜 __init__.py | | |- 📜 ml_trainer.py : train a classical machine learning learning model on the dataset +| | |- 📜 __init__.py | |- 📂 common: -| | |- 📜 loss_functions.py : loss function enum +| | |- 📜 ai_drive.py | | |- 📜 default_datasets.py : store logic to load in default datasets from scikit-learn -| | |- 📜 dataset.py : read in the dataset through URL or file upload -| | |- 📜 constants.py : list of helpful constants -| | |- 📜 utils.py : utility functions that could be helpful -| | |- 📜 __init__.py +| | |- 📜 email_notifier.py : Endpoint to send email notification of training results via API Gateway + AWS SES | | |- 📜 preprocessing.py -| | |- 📜 ai_drive.py +| | |- 📜 utils.py : utility functions that could be helpful | | |- 📜 kernel.py -| | |- 📜 email_notifier.py : Endpoint to send email notification of training results via API Gateway + AWS SES +| | |- 📜 dataset.py : read in the dataset through URL or file upload +| | |- 📜 loss_functions.py : loss function enum | | |- 📜 optimizer.py : what optimizer to use (ie: SGD or Adam for now) -| |- 📂 dl: -| | |- 📜 dl_eval.py : Evaluation functions for deep learning models in Pytorch (eg: accuracy, loss, etc) -| | |- 📜 dl_model.py : torch model based on user specifications from drag and drop +| | |- 📜 constants.py : list of helpful constants | | |- 📜 __init__.py -| | |- 📜 dl_trainer.py : train a deep learning model on the dataset -| | |- 📜 dl_model_parser.py : parse the user specified pytorch model -| | |- 📜 detection.py -| |- 📜 app.py : run the backend (entrypoint script) | |- 📜 poetry.lock | |- 📜 epoch_times.csv -| |- 📜 __init__.py +| |- 📜 pyproject.toml | |- 📜 data.csv : data csv file for use in the playground +| |- 📜 app.py : run the backend (entrypoint script) | |- 📜 middleware.py -| |- 📜 pyproject.toml +| |- 📜 __init__.py ``` ## Frontend Architecture ``` 📦 frontend +| |- 📂 public: +| | |- 📂 images: +| | | |- 📂 wiki_images: +| | | | |- 📜 conv2d2.gif +| | | | |- 📜 softmax_equation.png : PNG file of Softmax equation +| | | | |- 📜 tanh_plot.png +| | | | |- 📜 maxpool2d.gif +| | | | |- 📜 conv2d.gif +| | | | |- 📜 avgpool_maxpool.gif +| | | | |- 📜 batchnorm_diagram.png +| | | | |- 📜 dropout_diagram.png +| | | | |- 📜 tanh_equation.png +| | | | |- 📜 sigmoid_equation.png +| | | |- 📂 logos: +| | | | |- 📂 dlp_branding: +| | | | | |- 📜 dlp-logo.svg : DLP Logo, duplicate of files in public, but essential as the frontend can't read public +| | | | | |- 📜 dlp-logo.png : DLP Logo, duplicate of files in public, but essential as the frontend can't read public +| | | | |- 📜 aws-logo.png +| | | | |- 📜 github.png +| | | | |- 📜 pandas-logo.png +| | | | |- 📜 dsgt-logo-white-back.png +| | | | |- 📜 dsgt-logo-light.png +| | | | |- 📜 flask-logo.png +| | | | |- 📜 pytorch-logo.png +| | | | |- 📜 google.png +| | | | |- 📜 react-logo.png +| | | | |- 📜 python-logo.png +| | | | |- 📜 dsgt-logo-dark.png +| | | |- 📂 learn_mod_images: +| | | | |- 📜 robotImage.jpg +| | | | |- 📜 sigmoidfunction.png +| | | | |- 📜 neuralnet.png +| | | | |- 📜 sigmoidactivation.png +| | | | |- 📜 lossExampleTable.png +| | | | |- 📜 binarystepactivation.png +| | | | |- 📜 lossExampleEquation.png +| | | | |- 📜 neuron.png +| | | | |- 📜 tanhactivation.png +| | | | |- 📜 LeakyReLUactivation.png +| | | | |- 📜 ReLUactivation.png +| | | | |- 📜 lossExample.png +| | | | |- 📜 neuronWithEquation.png +| | | |- 📜 demo_video.gif : GIF tutorial of a simple classification training session +| | |- 📜 index.html : Base HTML file that will be initially rendered +| | |- 📜 dlp-logo.ico : DLP Logo +| | |- 📜 manifest.json : Default React file for choosing icon based on +| | |- 📜 robots.txt | |- 📂 layer_docs: +| | |- 📜 softmax_equation.png : PNG file of Softmax equation | | |- 📜 Softmax.md : Doc for Softmax layer | | |- 📜 Linear.md : Doc for Linear layer | | |- 📜 ReLU.md : Doc for ReLU later -| | |- 📜 softmax_equation.png : PNG file of Softmax equation | |- 📂 src: +| | |- 📂 backend_outputs: +| | | |- 📜 model.pt : Last model.pt output +| | | |- 📜 model.pkl +| | | |- 📜 my_deep_learning_model.onnx : Last ONNX file output +| | |- 📂 pages: +| | | |- 📂 train: +| | | | |- 📜 index.tsx +| | | | |- 📜 [train_space_id].tsx +| | | |- 📜 dashboard.tsx +| | | |- 📜 LearnContent.tsx +| | | |- 📜 _document.tsx +| | | |- 📜 about.tsx +| | | |- 📜 wiki.tsx +| | | |- 📜 login.tsx +| | | |- 📜 learn.tsx +| | | |- 📜 _app.tsx +| | | |- 📜 forgot.tsx +| | | |- 📜 feedback.tsx +| | | |- 📜 settings.tsx | | |- 📂 features: -| | | |- 📂 LearnMod: -| | | | |- 📜 ModulesSideBar.tsx -| | | | |- 📜 MCQuestion.tsx -| | | | |- 📜 ClassCard.tsx -| | | | |- 📜 ImageComponent.tsx -| | | | |- 📜 FRQuestion.tsx -| | | | |- 📜 LearningModulesContent.tsx -| | | | |- 📜 Exercise.tsx -| | | |- 📂 Dashboard: +| | | |- 📂 OpenAi: +| | | | |- 📜 openAiUtils.ts +| | | |- 📂 Feedback: | | | | |- 📂 redux: -| | | | | |- 📜 dashboardApi.ts +| | | | | |- 📜 feedbackApi.ts +| | | |- 📂 Dashboard: | | | | |- 📂 components: | | | | | |- 📜 TrainBarChart.tsx -| | | | | |- 📜 TrainDoughnutChart.tsx | | | | | |- 📜 TrainDataGrid.tsx +| | | | | |- 📜 TrainDoughnutChart.tsx +| | | | |- 📂 redux: +| | | | | |- 📜 dashboardApi.ts | | | |- 📂 Train: +| | | | |- 📂 constants: +| | | | | |- 📜 trainConstants.ts +| | | | |- 📂 components: +| | | | | |- 📜 DatasetStepLayout.tsx +| | | | | |- 📜 CreateTrainspace.tsx +| | | | | |- 📜 TrainspaceLayout.tsx +| | | | |- 📂 redux: +| | | | | |- 📜 trainspaceSlice.ts +| | | | | |- 📜 trainspaceApi.ts | | | | |- 📂 features: | | | | | |- 📂 Tabular: -| | | | | | |- 📂 redux: -| | | | | | | |- 📜 tabularActions.ts -| | | | | | | |- 📜 tabularApi.ts +| | | | | | |- 📂 constants: +| | | | | | | |- 📜 tabularConstants.ts | | | | | | |- 📂 components: | | | | | | | |- 📜 TabularReviewStep.tsx | | | | | | | |- 📜 TabularDatasetStep.tsx -| | | | | | | |- 📜 TabularFlow.tsx | | | | | | | |- 📜 TabularTrainspace.tsx | | | | | | | |- 📜 TabularParametersStep.tsx +| | | | | | | |- 📜 TabularFlow.tsx +| | | | | | |- 📂 redux: +| | | | | | | |- 📜 tabularApi.ts +| | | | | | | |- 📜 tabularActions.ts | | | | | | |- 📂 types: | | | | | | | |- 📜 tabularTypes.ts -| | | | | | |- 📂 constants: -| | | | | | | |- 📜 tabularConstants.ts | | | | | | |- 📜 index.ts | | | | | |- 📂 Image: -| | | | | | |- 📂 redux: -| | | | | | | |- 📜 imageActions.ts -| | | | | | | |- 📜 imageApi.ts +| | | | | | |- 📂 constants: +| | | | | | | |- 📜 imageConstants.ts | | | | | | |- 📂 components: -| | | | | | | |- 📜 ImageDatasetStep.tsx -| | | | | | | |- 📜 ImageTrainspace.tsx | | | | | | | |- 📜 ImageReviewStep.tsx -| | | | | | | |- 📜 ImageParametersStep.tsx +| | | | | | | |- 📜 ImageTrainspace.tsx +| | | | | | | |- 📜 ImageDatasetStep.tsx | | | | | | | |- 📜 ImageFlow.tsx +| | | | | | | |- 📜 ImageParametersStep.tsx +| | | | | | |- 📂 redux: +| | | | | | | |- 📜 imageApi.ts +| | | | | | | |- 📜 imageActions.ts | | | | | | |- 📂 types: | | | | | | | |- 📜 imageTypes.ts -| | | | | | |- 📂 constants: -| | | | | | | |- 📜 imageConstants.ts | | | | | | |- 📜 index.ts -| | | | |- 📂 redux: -| | | | | |- 📜 trainspaceApi.ts -| | | | | |- 📜 trainspaceSlice.ts -| | | | |- 📂 components: -| | | | | |- 📜 DatasetStepLayout.tsx -| | | | | |- 📜 CreateTrainspace.tsx -| | | | | |- 📜 TrainspaceLayout.tsx | | | | |- 📂 types: | | | | | |- 📜 trainTypes.ts -| | | | |- 📂 constants: -| | | | | |- 📜 trainConstants.ts -| | | |- 📂 Feedback: -| | | | |- 📂 redux: -| | | | | |- 📜 feedbackApi.ts -| | | |- 📂 OpenAi: -| | | | |- 📜 openAiUtils.ts -| | |- 📂 pages: -| | | |- 📂 train: -| | | | |- 📜 [train_space_id].tsx -| | | | |- 📜 index.tsx -| | | |- 📜 LearnContent.tsx -| | | |- 📜 feedback.tsx -| | | |- 📜 dashboard.tsx -| | | |- 📜 learn.tsx -| | | |- 📜 wiki.tsx -| | | |- 📜 forgot.tsx -| | | |- 📜 about.tsx -| | | |- 📜 _app.tsx -| | | |- 📜 login.tsx -| | | |- 📜 _document.tsx -| | | |- 📜 settings.tsx +| | | |- 📂 LearnMod: +| | | | |- 📜 ClassCard.tsx +| | | | |- 📜 MCQuestion.tsx +| | | | |- 📜 Exercise.tsx +| | | | |- 📜 ModulesSideBar.tsx +| | | | |- 📜 FRQuestion.tsx +| | | | |- 📜 LearningModulesContent.tsx +| | | | |- 📜 ImageComponent.tsx | | |- 📂 common: | | | |- 📂 styles: -| | | | |- 📜 Home.module.css | | | | |- 📜 globals.css -| | | |- 📂 redux: -| | | | |- 📜 hooks.ts -| | | | |- 📜 train.ts -| | | | |- 📜 store.ts -| | | | |- 📜 backendApi.ts -| | | | |- 📜 userLogin.ts +| | | | |- 📜 Home.module.css | | | |- 📂 components: +| | | | |- 📜 ClientOnlyPortal.tsx +| | | | |- 📜 Spacer.tsx | | | | |- 📜 DlpTooltip.tsx +| | | | |- 📜 TitleText.tsx | | | | |- 📜 Footer.tsx -| | | | |- 📜 HtmlTooltip.tsx | | | | |- 📜 NavBarMain.tsx -| | | | |- 📜 Spacer.tsx +| | | | |- 📜 HtmlTooltip.tsx | | | | |- 📜 EmailInput.tsx -| | | | |- 📜 TitleText.tsx -| | | | |- 📜 ClientOnlyPortal.tsx +| | | |- 📂 redux: +| | | | |- 📜 userLogin.ts +| | | | |- 📜 store.ts +| | | | |- 📜 train.ts +| | | | |- 📜 backendApi.ts +| | | | |- 📜 hooks.ts | | | |- 📂 utils: -| | | | |- 📜 dndHelpers.ts | | | | |- 📜 firebase.ts | | | | |- 📜 dateFormat.ts -| | |- 📂 backend_outputs: -| | | |- 📜 model.pt : Last model.pt output -| | | |- 📜 my_deep_learning_model.onnx : Last ONNX file output -| | | |- 📜 model.pkl +| | | | |- 📜 dndHelpers.ts | | |- 📜 next-env.d.ts +| | |- 📜 GlobalStyle.ts | | |- 📜 iris.csv : Sample CSV data | | |- 📜 constants.ts -| | |- 📜 GlobalStyle.ts -| |- 📂 public: -| | |- 📂 images: -| | | |- 📂 wiki_images: -| | | | |- 📜 sigmoid_equation.png -| | | | |- 📜 batchnorm_diagram.png -| | | | |- 📜 maxpool2d.gif -| | | | |- 📜 conv2d.gif -| | | | |- 📜 conv2d2.gif -| | | | |- 📜 dropout_diagram.png -| | | | |- 📜 tanh_equation.png -| | | | |- 📜 avgpool_maxpool.gif -| | | | |- 📜 tanh_plot.png -| | | | |- 📜 softmax_equation.png : PNG file of Softmax equation -| | | |- 📂 learn_mod_images: -| | | | |- 📜 neuralnet.png -| | | | |- 📜 robotImage.jpg -| | | | |- 📜 ReLUactivation.png -| | | | |- 📜 neuronWithEquation.png -| | | | |- 📜 tanhactivation.png -| | | | |- 📜 sigmoidactivation.png -| | | | |- 📜 binarystepactivation.png -| | | | |- 📜 lossExampleTable.png -| | | | |- 📜 sigmoidfunction.png -| | | | |- 📜 neuron.png -| | | | |- 📜 LeakyReLUactivation.png -| | | | |- 📜 lossExample.png -| | | | |- 📜 lossExampleEquation.png -| | | |- 📂 logos: -| | | | |- 📂 dlp_branding: -| | | | | |- 📜 dlp-logo.png : DLP Logo, duplicate of files in public, but essential as the frontend can't read public -| | | | | |- 📜 dlp-logo.svg : DLP Logo, duplicate of files in public, but essential as the frontend can't read public -| | | | |- 📜 dsgt-logo-dark.png -| | | | |- 📜 google.png -| | | | |- 📜 react-logo.png -| | | | |- 📜 flask-logo.png -| | | | |- 📜 pytorch-logo.png -| | | | |- 📜 aws-logo.png -| | | | |- 📜 dsgt-logo-light.png -| | | | |- 📜 github.png -| | | | |- 📜 pandas-logo.png -| | | | |- 📜 python-logo.png -| | | | |- 📜 dsgt-logo-white-back.png -| | | |- 📜 demo_video.gif : GIF tutorial of a simple classification training session -| | |- 📜 index.html : Base HTML file that will be initially rendered -| | |- 📜 robots.txt -| | |- 📜 manifest.json : Default React file for choosing icon based on -| | |- 📜 dlp-logo.ico : DLP Logo -| |- 📜 package.json -| |- 📜 .eslintrc.json +| |- 📜 jest.config.js +| |- 📜 next.config.js | |- 📜 next-env.d.ts +| |- 📜 .eslintrc.json +| |- 📜 .eslintignore | |- 📜 tsconfig.json +| |- 📜 package.json | |- 📜 yarn.lock -| |- 📜 .eslintignore -| |- 📜 next.config.js -| |- 📜 jest.config.js ``` diff --git a/.github/pull_request_template.md b/.github/pull_request_template.md index 4c6584a76..5342aef1e 100644 --- a/.github/pull_request_template.md +++ b/.github/pull_request_template.md @@ -6,7 +6,7 @@ Github Issue Number Here: **What solution does this PR provide?** **Testing Methodology** -How did you test your changes and verify that existing -functionality is not broken +> How did you test your changes and verify that existing +> functionality is not broken **Any other considerations** \ No newline at end of file diff --git a/.github/workflows/backend.yml b/.github/workflows/backend.yml index a7749a3e1..24adeebaa 100644 --- a/.github/workflows/backend.yml +++ b/.github/workflows/backend.yml @@ -12,22 +12,37 @@ on: jobs: lint: - runs-on: ubuntu-22.04 + runs-on: ubuntu-latest steps: #---------------------------------------------- # check-out repo and set-up mamba env #---------------------------------------------- - name: Check out repository uses: actions/checkout@v3 - - - uses: mamba-org/setup-micromamba@v1 + + - name: Setup Mamba + uses: conda-incubator/setup-miniconda@v2 with: - micromamba-version: '1.4.5-0' - environment-file: training/environment.yml - init-shell: >- - bash - cache-environment: true - cache-environment-key: mamba-env-${{ runner.os }}-${{ hashFiles('**/training/environment.yml') }} + miniforge-version: latest + use-mamba: true + activate-environment: dlp + + - name: Cache Mamba env + id: cached-mamba-env + uses: actions/cache@v3 + env: + # Increase this value to reset cache if etc/example-environment.yml has not changed + CACHE_NUMBER: 0 + with: + path: /usr/share/miniconda3/envs/ + key: + mamba-${{ runner.os }}-${{env.CACHE_NUMBER }}-${{hashFiles('**/training/environment.yml') }} + + - name: Update environment + run: + mamba env update -n dlp -f + training/environment.yml + if: steps.cached-mamba-env.outputs.cache-hit != 'true' #---------------------------------------------- # load cached venv if cache exists @@ -36,7 +51,7 @@ jobs: id: cached-poetry-dependencies uses: actions/cache@v3 with: - path: /home/runner/micromamba/envs/dlp/ + path: /usr/share/miniconda3/envs/dlp key: training-venv-${{ runner.os }}-${{ hashFiles('**/training/poetry.lock') }} restore-keys: training-venv-${{ runner.os }}- @@ -47,8 +62,11 @@ jobs: - name: Install dependencies if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true' run: pwd && cd training && poetry install --no-interaction --no-root && poetry env info -p - shell: micromamba-shell {0} + shell: bash -el {0} + - name: Add Poetry env to PATH + run: cd training && echo "$(poetry env info --path)/bin" >> $GITHUB_PATH + shell: bash -el {0} #---------------------------------------------- # pyright static checker #---------------------------------------------- @@ -58,7 +76,6 @@ jobs: with: github_token: ${{ secrets.GITHUB_TOKEN }} # You need this reporter: github-pr-review # Change reporter. - lib: true #---------------------------------------------- # black formatter @@ -85,33 +102,54 @@ jobs: #---------------------------------------------- - name: Check out repository uses: actions/checkout@v3 + + - name: Setup Mamba + uses: conda-incubator/setup-miniconda@v2 + with: + miniforge-version: latest + use-mamba: true + activate-environment: dlp - - uses: mamba-org/setup-micromamba@v1 + - name: Cache Mamba env + id: cached-mamba-env + uses: actions/cache@v3 + env: + # Increase this value to reset cache if etc/example-environment.yml has not changed + CACHE_NUMBER: 0 with: - micromamba-version: '1.4.5-0' - environment-file: training/environment.yml - init-shell: >- - bash - cache-environment: true - cache-environment-key: mamba-env-${{ runner.os }}-${{ hashFiles('**/training/environment.yml') }} + path: /usr/share/miniconda3/envs/ + key: + mamba-${{ runner.os }}-${{env.CACHE_NUMBER }}-${{hashFiles('**/training/environment.yml') }} + + - name: Update environment + run: + mamba env update -n dlp -f + training/environment.yml + if: steps.cached-mamba-env.outputs.cache-hit != 'true' #---------------------------------------------- # load cached venv if cache exists #---------------------------------------------- + - name: Load cached venv id: cached-poetry-dependencies uses: actions/cache@v3 with: - path: /home/runner/micromamba/envs/dlp/ + path: /usr/share/miniconda3/envs/dlp key: training-venv-${{ runner.os }}-${{ hashFiles('**/training/poetry.lock') }} restore-keys: training-venv-${{ runner.os }}- + #---------------------------------------------- # install dependencies if cache does not exist #---------------------------------------------- - name: Install dependencies if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true' run: cd training && poetry install --no-interaction --no-root - shell: micromamba-shell {0} + shell: bash -el {0} + + - name: Add Poetry env to PATH + run: cd training && echo "$(poetry env info --path)/bin" >> $GITHUB_PATH + shell: bash -el {0} #---------------------------------------------- # run test suite #---------------------------------------------- @@ -120,6 +158,6 @@ jobs: export AWS_ACCESS_KEY_ID=testing export AWS_SECRET_ACCESS_KEY=testing export AWS_DEFAULT_REGION=us-west-2 - # cd training && pytest tests - shell: micromamba-shell {0} + cd training && poetry run pytest tests + shell: bash -el {0} diff --git a/.github/workflows/issue-form-submission.yml b/.github/workflows/issue-form-submission.yml index 30898fb8d..7a51b4949 100644 --- a/.github/workflows/issue-form-submission.yml +++ b/.github/workflows/issue-form-submission.yml @@ -1,102 +1,102 @@ -name: Comment on Issue -on: - issues: - types: - - opened - -jobs: - comment-on-issue: - runs-on: ubuntu-latest - steps: - - name: Comment on Issue - uses: actions/github-script@v6 - with: - github-token: ${{ secrets.GITHUB_TOKEN }} - script: | - const issueNumber = context.issue.number; - const labels = context.payload.issue.labels.map(label => label.name); - - const isBugRequest = labels.includes('bug'); - const isFeatureRequest = labels.includes('enhancement'); - const defaultBranch = "nextjs" - - if (isBugRequest) { - const branchName = `bug-${issueNumber}`; - - const branchSetupInstructions = ` - Hello @${{ github.actor }}! Thank you for submitting the Bug Request Form. We appreciate your contribution. :wave: - - We will look into it and provide a response as soon as possible. - - To work on this bug request, you can follow these branch setup instructions: - - 1. Checkout the main branch: - - \`\`\` - git checkout ${defaultBranch} - \`\`\` - - 2. Pull the latest changes from the remote main branch: - - \`\`\` - git pull origin ${defaultBranch} - \`\`\` - - 3. Create a new branch specific to this bug request using the issue number: - \`\`\` - git checkout -b ${branchName} - \`\`\` - - Feel free to make the necessary changes in this branch and submit a pull request when you're ready. - - Best regards, - Deep Learning Playground (DLP) Team - `; - - github.rest.issues.createComment({ - owner: context.repo.owner, - repo: context.repo.repo, - issue_number: context.issue.number, - body: branchSetupInstructions - }); - } else if (isFeatureRequest) { - const branchName = `feature-${issueNumber}`; - - const branchSetupInstructions = ` - Hello @${{ github.actor }}! Thank you for submitting the Feature Request Form. We appreciate your contribution. :wave: - - We will look into it and provide a response as soon as possible. - - To work on this feature request, you can follow these branch setup instructions: - - 1. Checkout the main branch: - - \`\`\` - git checkout ${defaultBranch} - \`\`\` - - 2. Pull the latest changes from the remote main branch: - - \`\`\` - git pull origin ${defaultBranch} - \`\`\` - - 3. Create a new branch specific to this feature request using the issue number: - - \`\`\` - git checkout -b ${branchName} - \`\`\` - - Feel free to make the necessary changes in this branch and submit a pull request when you're ready. - - Best regards, - Deep Learning Playground (DLP) Team - `; - - github.rest.issues.createComment({ - owner: context.repo.owner, - repo: context.repo.repo, - issue_number: context.issue.number, - body: branchSetupInstructions - }); - } +name: Comment on Issue +on: + issues: + types: + - opened + +jobs: + comment-on-issue: + runs-on: ubuntu-latest + steps: + - name: Comment on Issue + uses: actions/github-script@v6 + with: + github-token: ${{ secrets.GITHUB_TOKEN }} + script: | + const issueNumber = context.issue.number; + const labels = context.payload.issue.labels.map(label => label.name); + + const isBugRequest = labels.includes('bug'); + const isFeatureRequest = labels.includes('enhancement'); + const defaultBranch = "nextjs" + + if (isBugRequest) { + const branchName = `bug-${issueNumber}`; + + const branchSetupInstructions = ` + Hello @${{ github.actor }}! Thank you for submitting the 🐞Bug Request Form. We appreciate your contribution. :wave: + + We will look into it and provide a response as soon as possible. + + To work on this bug request, you can follow these branch setup instructions: + + 1. Checkout the main branch: + + \`\`\` + git checkout ${defaultBranch} + \`\`\` + + 2. Pull the latest changes from the remote main branch: + + \`\`\` + git pull origin ${defaultBranch} + \`\`\` + + 3. Create a new branch specific to this bug request using the issue number: + \`\`\` + git checkout -b ${branchName} + \`\`\` + + Feel free to make the necessary changes in this branch and submit a pull request when you're ready. + + Best regards, + Deep Learning Playground (DLP) Team + `; + + github.rest.issues.createComment({ + owner: context.repo.owner, + repo: context.repo.repo, + issue_number: context.issue.number, + body: branchSetupInstructions + }); + } else if (isFeatureRequest) { + const branchName = `feature-${issueNumber}`; + + const branchSetupInstructions = ` + Hello @${{ github.actor }}! Thank you for submitting the Feature Request Form. We appreciate your contribution. :wave: + + We will look into it and provide a response as soon as possible. + + To work on this feature request, you can follow these branch setup instructions: + + 1. Checkout the main branch: + + \`\`\` + git checkout ${defaultBranch} + \`\`\` + + 2. Pull the latest changes from the remote main branch: + + \`\`\` + git pull origin ${defaultBranch} + \`\`\` + + 3. Create a new branch specific to this feature request using the issue number: + + \`\`\` + git checkout -b ${branchName} + \`\`\` + + Feel free to make the necessary changes in this branch and submit a pull request when you're ready. + + Best regards, + Deep Learning Playground (DLP) Team + `; + + github.rest.issues.createComment({ + owner: context.repo.owner, + repo: context.repo.repo, + issue_number: context.issue.number, + body: branchSetupInstructions + }); + } diff --git a/README.md b/README.md index 5ba5c8fa4..3177059ae 100644 --- a/README.md +++ b/README.md @@ -92,6 +92,28 @@ Run the following commands in the project directory (the root folder created aft Make sure to run the above two commands in separate terminals. +## AWS Setup +If you will be working on tasks that interface with AWS resources/services, please follow the below steps (please install AWS CLI using this [link](https://docs.aws.amazon.com/cli/latest/userguide/getting-started-install.html) first): + +1. Request an AWS Account for Deep Learning Playground by messaging Faris, Karthik, or Daniel in the DLP Discord. Please include your Github username along with your personal email account +1. Once an AWS Account has been created, you will receive an email from AWS that will require you to setup a password +1. When you login, you should be seeing that the account you're added under is `Data Science Initiative Inc` +1. Click on the dropdown to expand the `Data Science Initiative Inc` entry and select the `Command Line or programmatic access button` +1. Open your terminal and navigate to the DLP directory + 1. Run `aws configure sso``. Follow the prompts to enter the SSO Start URL (this comes from step 2) and the below values + ``` + sso_region = us-east-1 + sso_session = dlp + sso_registration_scopes = sso:account:access + default output format = None + cli profile name = just press enter (use the default one provided) + ```` + 1. Make sure you follow the instructions in the terminal to ensure your credentials are set correctly (eg: allow botocore to access data should be selected as "yes") + 1. Run `cat ~/.aws/config` to look for the sso profile configured. + 1. Run `export AWS_PROFILE=` + +Please message in the DLP Discord if you have any difficulty/issue with these steps. + # Architecture See [Architecture.md](./.github/Architecture.md) diff --git a/backend/poetry.lock b/backend/poetry.lock index 450be8213..935e2752f 100644 --- a/backend/poetry.lock +++ b/backend/poetry.lock @@ -1,6088 +1,6088 @@ -# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand. - -[[package]] -name = "aiohttp" -version = "3.8.5" -description = "Async http client/server framework (asyncio)" -optional = false -python-versions = ">=3.6" -files = [ - {file = "aiohttp-3.8.5-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:a94159871304770da4dd371f4291b20cac04e8c94f11bdea1c3478e557fbe0d8"}, - {file = "aiohttp-3.8.5-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:13bf85afc99ce6f9ee3567b04501f18f9f8dbbb2ea11ed1a2e079670403a7c84"}, - {file = "aiohttp-3.8.5-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:2ce2ac5708501afc4847221a521f7e4b245abf5178cf5ddae9d5b3856ddb2f3a"}, - 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not isinstance(module, nn.Sequential)]: " - + str( - [ - module - for module in my_model.model.modules() - if not isinstance(module, nn.Sequential) - ] - ) - ) assert [ module for module in my_model.model.modules() diff --git a/backend/tests/test_model_parser.py b/backend/tests/test_model_parser.py index 9628cf947..927875e3a 100644 --- a/backend/tests/test_model_parser.py +++ b/backend/tests/test_model_parser.py @@ -1,6 +1,5 @@ import pytest import torch.nn as nn -from torch.autograd import Variable from dl.dl_model_parser import * # come up with the expected parsing @@ -27,9 +26,4 @@ ], ) def test_parse_user_architecture(user_model, expected): - print( - "parse_user_architecture(user_model): " - + str(parse_deep_user_architecture(user_model)) - ) - print("expected: " + str(expected)) assert [i == j for i, j in zip(parse_deep_user_architecture(user_model), expected)] diff --git a/dlp-cli b/dlp-cli index 2ed81dc17..1d4a27903 160000 --- a/dlp-cli +++ b/dlp-cli @@ -1 +1 @@ -Subproject 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a/training/pytest.ini b/training/pytest.ini new file mode 100644 index 000000000..a8b7a9643 --- /dev/null +++ b/training/pytest.ini @@ -0,0 +1,2 @@ +[pytest] +DJANGO_SETTINGS_MODULE = training.settings \ No newline at end of file diff --git a/training/tests/test_imports.py b/training/tests/test_imports.py new file mode 100644 index 000000000..cddba8b47 --- /dev/null +++ b/training/tests/test_imports.py @@ -0,0 +1,6 @@ +def test_all_imports(): + import training.core.dataset + import training.core.criterion + import training.core.optimizer + import training.core.dl_model + import training.core.trainer diff --git a/training/tests/test_loss_function.py b/training/tests/test_loss_function.py new file mode 100644 index 000000000..98f06e975 --- /dev/null +++ b/training/tests/test_loss_function.py @@ -0,0 +1,61 @@ +import pytest +import torch +import torch.nn as nn +from training.core.criterion import getCriterionHandler + + +""" +Unit tests to check that the loss function is being computed correctly +""" + + +# initialize some tensors +zero_tensor = torch.zeros(10, 1, 1) +one_tensor = torch.ones(10, 1, 1) +tensor_vstack_one = torch.vstack( + [torch.tensor([[2.5], [56.245], [2342.68967]]), torch.tensor([[3], [4], [5]])] +).reshape((6, 1, 1)) +tensor_vstack_two = torch.vstack( + [torch.tensor([[5646456], [634767], [37647346]]), torch.tensor([[6], [7], [8]])] +).reshape((6, 1, 1)) + + +def compute_loss(loss_function_name, output, labels): + loss_function = getCriterionHandler(loss_function_name) + return loss_function.compute_loss(output, labels) + + +@pytest.mark.parametrize( + "output, labels, expected_number", + [ + (zero_tensor, one_tensor, 1.0), + (tensor_vstack_one, tensor_vstack_two, 7321426), + ], +) +def test_l1_loss_computation_correct(output, labels, expected_number): + loss_function_name = "L1LOSS" + computed_loss = compute_loss(loss_function_name, output, labels) + assert pytest.approx(expected_number) == computed_loss + + +@pytest.mark.parametrize( + "output, labels, expected_number", + [ + (zero_tensor, one_tensor, 1.0), + (tensor_vstack_one, tensor_vstack_two, 15543340), + ], +) +def test_mse_loss_computation_correct(output, labels, expected_number): + loss_function_name = "MSELOSS" + computed_loss = compute_loss(loss_function_name, output, labels) + assert pytest.approx(expected_number) == torch.sqrt(computed_loss) + + +@pytest.mark.parametrize( + "output, labels, expected_number", + [(zero_tensor.reshape((10, 1)), one_tensor.reshape(10), 100)], +) +def test_bce_loss_computation_correct(output, labels, expected_number): + loss_function_name = "BCELOSS" + computed_loss = compute_loss(loss_function_name, output, labels) + assert pytest.approx(expected_number) == computed_loss diff --git a/training/tests/test_model.py b/training/tests/test_model.py new file mode 100644 index 000000000..7883a4d35 --- /dev/null +++ b/training/tests/test_model.py @@ -0,0 +1,21 @@ +import pytest +import torch.nn as nn +from torch.autograd import Variable +from training.core.dl_model import DLModel + + +@pytest.mark.parametrize( + "input_list", + [ + ([nn.Linear(10, 5), nn.Linear(5, 3)]), + ([nn.Linear(0, 0), nn.Linear(0, 0)]), + ([nn.Linear(100, 50), nn.Linear(5, 3)]), + ], +) +def test_dlmodel(input_list): + my_model = DLModel(input_list) + assert [ + module + for module in my_model.model.modules() + if not isinstance(module, nn.Sequential) + ] == input_list diff --git a/training/tests/test_sk_learn_default_dataset_train_test.py b/training/tests/test_sk_learn_default_dataset_train_test.py new file mode 100644 index 000000000..2ed58a47d --- /dev/null +++ b/training/tests/test_sk_learn_default_dataset_train_test.py @@ -0,0 +1,81 @@ +from training.core.dataset import SklearnDatasetCreator +from torch.utils.data import DataLoader + + +def test_iris_train_test_split(): + dataset_name = "IRIS" + test_size = 0.2 + shuffle = True + + dataCreator = SklearnDatasetCreator.fromDefault(dataset_name, test_size, shuffle) + + X_train, X_test, y_train, y_test = ( + dataCreator._X_train, + dataCreator._X_test, + dataCreator._y_train, + dataCreator._y_test, + ) + + total_dataset_size = len(dataCreator.getDefaultDataset(dataset_name)) + + expected_size = int(total_dataset_size * test_size) + + assert len(X_test) == expected_size + assert len(y_test) == expected_size + + +def test_iris_train_test_loader(): + dataset_name = "IRIS" + test_size = 0.2 + shuffle = True + batch_size = 20 + drop_last = True + + dataCreator = SklearnDatasetCreator.fromDefault(dataset_name, test_size, shuffle) + + train_loader = DataLoader( + dataCreator.createTrainDataset(), + batch_size=batch_size, + shuffle=shuffle, + drop_last=drop_last, + ) + + test_loader = DataLoader( + dataCreator.createTestDataset(), + batch_size=batch_size, + shuffle=shuffle, + drop_last=drop_last, + ) + + # Check that all batches in the train loader and test loader have size batch_size and there are the right number of batches + X_train, X_test, y_train, y_test = ( + dataCreator._X_train, + dataCreator._X_test, + dataCreator._y_train, + dataCreator._y_test, + ) + + total_dataset_size = len(dataCreator.getDefaultDataset(dataset_name)) + + test_len = total_dataset_size * test_size + train_len = total_dataset_size - test_len + + num_train_batches_expected = train_len // batch_size + num_test_batches_expected = test_len // batch_size + + train_batch_count = 0 + test_batch_count = 0 + + for batch in train_loader: + train_features, train_labels = batch + train_batch_count += 1 + assert train_features.size()[0] == batch_size + + assert train_batch_count == num_train_batches_expected + + for batch in test_loader: + test_features, test_labels = batch + test_batch_count += 1 + assert test_features.size()[0] == batch_size + + assert test_batch_count == num_test_batches_expected diff --git a/training/training/core/dataset.py b/training/training/core/dataset.py index f7a5348a9..dce483f18 100644 --- a/training/training/core/dataset.py +++ b/training/training/core/dataset.py @@ -53,7 +53,7 @@ def __init__( ) @classmethod - def getDefaultDataset(cls, name: str): + def getDefaultDataset(cls, name: str) -> pd.DataFrame: raw_data = cls.DEFAULT_DATASETS[name]() default_dataset = pd.DataFrame( data=np.c_[raw_data["data"], raw_data["target"]], # type: ignore diff --git a/training/training/core/dl_model.py b/training/training/core/dl_model.py index d35d0ff17..052ea2199 100644 --- a/training/training/core/dl_model.py +++ b/training/training/core/dl_model.py @@ -1,8 +1,6 @@ from typing import Any, Callable -from ninja import Schema import torch import torch.nn as nn -from typing import TYPE_CHECKING from training.routes.tabular.schemas import LayerParams @@ -49,5 +47,5 @@ def build_model(self, layer_list): return model def forward(self, x: torch.Tensor): - pred = self.model(x) # apply model on input x + pred = self.model(x) return pred diff --git a/training/training/routes/datasets/default/__init__.py b/training/training/routes/datasets/default/__init__.py index 2a6f5e11b..e69de29bb 100644 --- a/training/training/routes/datasets/default/__init__.py +++ b/training/training/routes/datasets/default/__init__.py @@ -1,5 +0,0 @@ -from training.routes.datasets.default.columns import router - - -def get_default_datasets_router(): - return router diff --git a/training/training/routes/tabular/__init__.py b/training/training/routes/tabular/__init__.py index 25bffee05..8b1378917 100644 --- a/training/training/routes/tabular/__init__.py +++ b/training/training/routes/tabular/__init__.py @@ -1,5 +1 @@ -from training.routes.tabular.tabular import router - -def get_tabular_router(): - return router diff --git a/training/training/urls.py b/training/training/urls.py index 34b27e81c..e0a8b6e1b 100644 --- a/training/training/urls.py +++ b/training/training/urls.py @@ -19,8 +19,8 @@ from django.http import HttpRequest from django.urls import path from ninja import NinjaAPI, Schema -from training.routes.datasets.default import get_default_datasets_router -from training.routes.tabular import get_tabular_router +from training.routes.datasets.default.columns import router as default_dataset_router +from training.routes.tabular.tabular import router as tabular_router api = NinjaAPI()