DESCRIPTION

Package: scMEGA
Type: Package
Title: Single-cell Multiomic Enhancer-based Gene Regulatory Network Inference
Version: 1.1.0
Author: Zhijian Li
Maintainer: Zhijian Li <lzj1769@gmail.com>
Description: Infering gene regulatory network from single-cell multi-omics data.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
URL: https://costalab.github.io/scMEGA/
Depends:
    R (>= 4.3.0)
Suggests: 
    knitr,
    rmarkdown,
    testthat (>= 3.0.0)
VignetteBuilder: knitr
LinkingTo: Rcpp
Remotes:
    satijalab/seurat@seurat5
Imports: 
    Rcpp,
    ArchR,
    SeuratObject,
    dplyr,
    optmatch,
    ggplot2,
    cowplot,
    ggpubr,
    destiny,
    pracma,
    igraph,
    glue,
    ComplexHeatmap,
    IRanges,
    Matrix,
    circlize,
    ggrepel,
    matrixStats,
    nabor,
    stringr,
    textshape,
    tidyr,
    GenomicRanges,
    S4Vectors,
    SummarizedExperiment,
    ggraph,
    factoextra
RoxygenNote: 7.3.1
Config/testthat/edition: 3