Error in [.Seurat(data, data$cell_type == i, ) : Incorrect number of logical values provided to subset features

[EAC-T]

Hi, I have a SEURAT object that I clustered into 7 clusters,
for the
highly_exprs_genes<-rawParse(Tcells_6,top_genes=50,stats='mean')

I'm getting an error:
Error in [.Seurat(data, data$cell_type == i, ) :
Incorrect number of logical values provided to subset features

The cell_type column contains numbers from 0 to 6 representing each cluster.

Thank you

[chase-pagani]

Having the same issue.

[chase-pagani]

try this:

data<-data.frame(SEURATOBJECT@assays$RNA@data)
data<-t(data)
data<-as.data.frame(data)
cell_types<[email protected] #or wherever you have your cell names
data$cell_type=cell_types