what information should be in the cell_type column?

[kaizen89]

Hi.
I have a count dataframe to which I added the cluster information to the cell_type column.
However the DEG function ecaluates length(unique(data$cell_type)) and stops if different than 1. does this mean that I can only have one cell type per data object?

[ywang65]

DEG function is designed to find differential expressed genes in one cell type between two time points. You can do a filtering for you data object before running this function.

[kaizen89]

The documentation is a bit confusing then.
It says "Differential expressed genes will becalled within each cell type". But actually it should be only one cell type.
Woule it ne possible to provide example data for the main functions to illustrate the documentation?
Thank you