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GDC.log
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[2018-10-17 15:55:27,924 - GDC - INFO] 50 Normal samples, 375 Tumor samples
[2018-10-17 15:56:25,618 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-17 15:56:25,618 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-17 15:56:28,715 - GDC - INFO] selected features are [88, 185, 445, 672, 969, 1099]
[2018-10-17 15:56:31,461 - GDC - INFO] scores are {'LogisticRegression': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663], 'ExtraTreesClassifier': [0.97272727272727277, 0.953125, 0.97272727272727277, 0.97272727272727277, 0.83333333333333337], 'RandomForestClassifier': [0.9732142857142857, 0.96875, 0.98198198198198194, 0.99090909090909096, 0.83333333333333337], 'AdaBoostClassifier': [0.9907407407407407, 0.96875, 0.98165137614678899, 0.97272727272727277, 0.94444444444444442], 'GradientBoostingClassifier': [0.97272727272727277, 0.953125, 0.97272727272727277, 0.97272727272727277, 0.83333333333333337], 'SVC': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663]}
[2018-10-19 16:39:55,367 - GDC - INFO] 50 Normal samples, 0 Tumor samples
[2018-10-19 16:41:50,724 - GDC - INFO] 50 Normal samples, 0 Tumor samples
[2018-10-19 16:42:36,612 - GDC - INFO] 50 Normal samples, 0 Tumor samples
[2018-10-19 17:10:30,272 - GDC - INFO] 50 Normal samples, 0 Tumor samples
[2018-10-19 17:11:12,895 - GDC - INFO] 50 Normal samples, 0 Tumor samples
[2018-10-19 17:12:32,213 - GDC - INFO] 50 Normal samples, 0 Tumor samples
[2018-10-19 17:15:06,845 - GDC - INFO] 50 Normal samples, 0 Tumor samples
[2018-10-19 17:16:49,228 - GDC - INFO] 0 Normal samples, 0 Tumor samples
[2018-10-19 17:17:44,184 - GDC - INFO] 0 Normal samples, 0 Tumor samples
[2018-10-19 17:18:49,501 - GDC - INFO] 0 Normal samples, 0 Tumor samples
[2018-10-19 17:19:19,042 - GDC - INFO] 0 Normal samples, 0 Tumor samples
[2018-10-19 17:19:44,054 - GDC - INFO] 0 Normal samples, 0 Tumor samples
[2018-10-19 17:20:12,629 - GDC - INFO] 0 Normal samples, 0 Tumor samples
[2018-10-22 14:34:46,693 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:34:46,693 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:34:49,760 - GDC - INFO] selected features are [88, 185, 445, 672, 969, 1099]
[2018-10-22 14:34:52,516 - GDC - INFO] scores are {'LogisticRegression': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663], 'ExtraTreesClassifier': [0.97272727272727277, 0.953125, 0.97272727272727277, 0.97272727272727277, 0.83333333333333337], 'RandomForestClassifier': [0.9732142857142857, 0.96875, 0.98198198198198194, 0.99090909090909096, 0.83333333333333337], 'AdaBoostClassifier': [0.9907407407407407, 0.96875, 0.98165137614678899, 0.97272727272727277, 0.94444444444444442], 'GradientBoostingClassifier': [0.97272727272727277, 0.953125, 0.97272727272727277, 0.97272727272727277, 0.83333333333333337], 'SVC': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663]}
[2018-10-22 14:50:43,277 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:50:43,278 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:50:45,970 - GDC - INFO] selected features are [88, 185, 445, 672, 969, 1099]
[2018-10-22 14:50:46,279 - GDC - INFO] scores are {'LogisticRegression': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663]}
[2018-10-22 14:52:47,492 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:52:47,492 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:52:50,208 - GDC - INFO] selected features are [88, 185, 445, 672, 969, 1099]
[2018-10-22 14:52:50,414 - GDC - INFO] scores are {'LogisticRegression': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663]}
[2018-10-22 14:53:06,200 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:53:06,200 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:53:08,863 - GDC - INFO] selected features are [88, 185, 445, 672, 969, 1099]
[2018-10-22 14:53:09,066 - GDC - INFO] scores are {'LogisticRegression': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663]}
[2018-10-22 14:54:15,944 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:54:15,944 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:54:18,534 - GDC - INFO] selected features are [88, 185, 445, 672, 969, 1099]
[2018-10-22 14:54:18,738 - GDC - INFO] scores are {'LogisticRegression': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663]}
[2018-10-22 14:55:27,795 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:55:27,795 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:55:30,496 - GDC - INFO] selected features are [88, 445, 969, 1099]
[2018-10-22 14:55:30,697 - GDC - INFO] scores are {'LogisticRegression': [0.95614035087719296, 0.953125, 0.97321428571428581, 0.99090909090909096, 0.72222222222222221]}
[2018-10-22 14:56:03,439 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:56:03,439 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:56:08,133 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:56:08,134 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:56:10,868 - GDC - INFO] selected features are [88, 445, 969, 1099]
[2018-10-22 14:56:11,067 - GDC - INFO] scores are {'LogisticRegression': [0.95614035087719296, 0.953125, 0.97321428571428581, 0.99090909090909096, 0.72222222222222221]}
[2018-10-22 14:56:28,850 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:56:28,851 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:56:31,536 - GDC - INFO] selected features are [88, 445, 969, 1099]
[2018-10-22 14:56:31,738 - GDC - INFO] scores are {'LogisticRegression': [0.95614035087719296, 0.953125, 0.97321428571428581, 0.99090909090909096, 0.72222222222222221]}
[2018-10-22 14:56:41,585 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 14:56:41,586 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 14:56:44,219 - GDC - INFO] selected features are [88, 969, 1099]
[2018-10-22 14:56:44,424 - GDC - INFO] scores are {'LogisticRegression': [0.95575221238938057, 0.9453125, 0.96860986547085204, 0.98181818181818181, 0.72222222222222221]}
[2018-10-22 15:05:22,247 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 15:05:22,247 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 15:05:25,068 - GDC - INFO] selected features are [88, 185, 445, 672, 969, 1099]
[2018-10-22 15:05:25,294 - GDC - INFO] scores are {'LogisticRegression': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663]}
[2018-10-22 15:10:18,964 - GDC - INFO] Percentage of tumor cases in training set is 0.8922558922558923
[2018-10-22 15:10:18,964 - GDC - INFO] Percentage of tumor cases in test set is 0.859375
[2018-10-22 15:10:21,850 - GDC - INFO] selected features are [88, 185, 445, 672, 969, 1099]
[2018-10-22 15:10:22,167 - GDC - INFO] scores are {'LogisticRegression': [0.94782608695652171, 0.9453125, 0.96888888888888891, 0.99090909090909096, 0.66666666666666663]}
[2018-10-22 15:12:18,046 - GDC - INFO] Percentage of tumor cases in training set is 12.957338308457711
[2018-10-22 15:12:18,047 - GDC - INFO] Percentage of tumor cases in test set is 12.895821242019734
[2018-10-22 15:16:50,575 - GDC - INFO] selected features are [49, 217, 240, 285, 287, 514, 1860]
[2018-10-22 15:29:23,314 - GDC - INFO] Percentage of tumor cases in training set is 12.957338308457711
[2018-10-22 15:29:23,315 - GDC - INFO] Percentage of tumor cases in test set is 12.895821242019734
[2018-10-22 15:33:47,567 - GDC - INFO] selected features are [49, 180, 217, 240, 248, 285, 287, 514, 1860]
[2018-10-22 15:33:48,749 - GDC - INFO] scores are {'LogisticRegression': [0.49970980847359259, 0.49970980847359259, 0.49970980847359259, 0.49970980847359259]}
[2018-10-22 15:37:43,844 - GDC - INFO] Percentage of tumor cases in training set is 12.957338308457711
[2018-10-22 15:37:43,845 - GDC - INFO] Percentage of tumor cases in test set is 12.895821242019734
[2018-10-22 15:42:08,781 - GDC - INFO] selected features are [49, 180, 217, 240, 248, 285, 287, 514, 1860]
[2018-10-22 15:42:10,008 - GDC - INFO] scores are {'LogisticRegression': [0.49970980847359259, 0.49970980847359259, 0.49970980847359259, 0.49970980847359259]}
[2018-10-22 15:54:01,737 - GDC - INFO] selected features are [9, 13, 49, 54, 71, 74, 96, 107, 149, 179, 180, 191, 217, 226, 240, 248, 252, 253, 269, 285, 287, 309, 338, 342, 353, 356, 487, 490, 495, 514, 588, 594, 631, 894, 991, 1101, 1121, 1214, 1285, 1299, 1330, 1462, 1577, 1637, 1742, 1791, 1848, 1860]
[2018-10-22 15:54:03,145 - GDC - INFO] scores are {'LogisticRegression': [0.84068485200232157, 0.84068485200232157, 0.84068485200232157, 0.84068485200232157]}
[2018-10-22 16:04:15,251 - GDC - INFO] selected features are [9, 13, 49, 54, 71, 74, 96, 107, 149, 179, 180, 191, 217, 226, 240, 248, 252, 253, 269, 285, 287, 309, 338, 342, 353, 356, 487, 490, 495, 514, 588, 594, 631, 894, 991, 1101, 1121, 1214, 1285, 1299, 1330, 1462, 1577, 1637, 1742, 1791, 1848, 1860]
[2018-10-22 16:04:15,556 - GDC - INFO] scores are {'LogisticRegression': [0.19849100406268136, 0.19849100406268136, 0.19849100406268136, 0.19849100406268136]}
[2018-10-22 16:10:50,000 - GDC - INFO] selected features are [9, 13, 49, 54, 71, 74, 78, 96, 107, 144, 149, 163, 179, 180, 185, 187, 191, 194, 195, 203, 204, 205, 217, 226, 240, 242, 248, 252, 253, 254, 269, 276, 282, 284, 285, 287, 301, 309, 316, 325, 328, 338, 342, 353, 356, 464, 487, 490, 495, 498, 500, 505, 514, 518, 538, 588, 594, 631, 714, 764, 767, 768, 795, 856, 894, 897, 957, 967, 991, 1006, 1056, 1066, 1101, 1106, 1121, 1125, 1214, 1285, 1299, 1309, 1330, 1342, 1371, 1388, 1462, 1527, 1530, 1577, 1632, 1637, 1655, 1689, 1722, 1742, 1768, 1791, 1834, 1838, 1848, 1860]
[2018-10-22 16:10:53,184 - GDC - INFO] scores are {'LogisticRegression': [0.87405687753917582, 0.87405687753917582, 0.87405687753917582, 0.87405687753917582]}