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History

0.8.4 (2018-03-20)

  • Try number two to get comet configuration to load singularity 2.3.2. See issue 76 below.

0.8.3 (2018-03-16)

  • Added --dontdeletescratch option to createtrainingmrcstack.py to skip deletion of scratchdir. Issue #78
  • Updated comet configuration to load singularity 2.3.2. Issue #76

0.8.2 (2017-07-27)

  • Fixed typo in history notes which caused pypi not to render project description properly

0.8.1 (2017-07-27)

  • Fixed bug in createtrainingmrcstack.py which caused program to fail due to incorrect call to get_image_path_list(). Issue #48
  • Increased required memory for merge tasks on Rocce cluster from 10 to 20 gigabytes of ram and added virtual_free constraint to handle gigapixel images. Issue #49

0.8.0 (2017-06-23)

  • Added --gentifs to createchmjob.py to generate tif probability map images Issue #43
  • Fixed bug in checkchmjob.py --detailed where ram value was incorrect Issue #44
  • Added information about input images to checkchmjob.py --detailed Issue #28

0.7.0 (2017-06-09)

  • Added --gentiles flag to createchmimage.py to generate tiles from image that can be viewed in probability map viewer. Issue #42
  • Added --rawthreshold flag to createprobmapoverlay.py which lets caller specify exact pixel intensity value instead of percentage as offered with --threshpc. Issue #41
  • Added virtual_free to requirements for SGE jobs submitted by createchmtrainjob.py to rocce cluster. Issue #40

0.6.0 (2017-03-03)

  • Added --detailed option to checkchmjob.py. Issue #6
  • Added --addprobmap to createprobmapoverlay.py to enable additional probability maps to be overlayed. Issue #25
  • Added createchmtrainjob.py script that creates a CHM train job. Issue #19
  • Fixed incorrect script names in readme.txt generated by createchmjob.py. Issue #20

0.5.1 (2017-01-12)

  • Fixed account not being put into runjobs.gordon and runmerge.gordon. Issue #11
  • Fixed errors in checking job status examples in readme.txt created by createchmjob.py. Issue #12

0.5.0 (2017-01-11)

  • First release on PyPI.