build_wheels.yml

name: Build  wheels

on:
  push:
    branches:
      - main
  pull_request:
  workflow_dispatch:
  release:
    types: [published]

permissions:  # Ensure the workflow has permission to push changes
  contents: write  # Allow write access for pushing to the repository

jobs:
  bump_version:
    runs-on: ubuntu-latest
    steps:
      - name: Checkout the code
        uses: actions/checkout@v4
        with:
          persist-credentials: true

      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: "3.x"

      - name: Install bump2version
        run: python -m pip install bump2version

      - name: Bump version (patch)
        run: |
          bump2version patch --current-version $(grep -Eo 'version="[^"]*' setup.py | cut -d'"' -f2) setup.py
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

      - name: Commit and push version bump
        run: |
          git config --global user.name "GitHub Actions"
          git config --global user.email "actions@github.com"
          git commit -am "Bump version"
          git push
        env:
          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
          
  build_wheels:
    runs-on: ${{ matrix.os }}
    needs: bump_version
    strategy:
      matrix:
        os: [ubuntu-latest,macos-latest]
        python-version: ["3.9"]

    steps:
      - name: Checkout the code
        uses: actions/checkout@v4

      - name: Set up Python
        uses: actions/setup-python@v5
        with:
          python-version: ${{ matrix.python-version }}

      - name: Clean up previous builds (if any)
        run: |
          rm -rf build dist *.egg-info class-sz/python/classy_sz.*so class-sz/python/classy_sz.*egg-info

      - name: Install system dependencies (Linux)
        if: matrix.os == 'ubuntu-latest'
        run: |
          sudo apt-get install -y libgsl-dev libfftw3-dev
          echo "Include paths for GSL and FFTW:"
          dpkg -L libgsl-dev | grep '/include'
          dpkg -L libfftw3-dev | grep '/include'
          echo "Library paths for GSL and FFTW:"
          dpkg -L libgsl-dev | grep '/lib'
          dpkg -L libfftw3-dev | grep '/lib'

      - name: Install cibuildwheel
        run: python -m pip install cibuildwheel==2.14.1

      # Build wheels for Linux (with custom build options)
      - name: Build wheels for Linux
        if: matrix.os == 'ubuntu-latest'
        env:
          CIBW_ENVIRONMENT: "LDFLAGS='-L/usr/lib/x86_64-linux-gnu' CFLAGS='-I/usr/include' LIBRARY_PATH='/usr/lib/x86_64-linux-gnu:$LIBRARY_PATH' C_INCLUDE_PATH='/usr/include:$C_INCLUDE_PATH' LD_LIBRARY_PATH='/usr/lib/x86_64-linux-gnu:$LD_LIBRARY_PATH'"
          CIBW_BUILD: "cp39-manylinux_x86_64"  # Constrain build to cp39-manylinux_x86_64
          CIBW_BEFORE_BUILD: |
            # Build GSL from source
            curl -O https://ftp.gnu.org/gnu/gsl/gsl-2.7.1.tar.gz
            tar -xzf gsl-2.7.1.tar.gz
            cd gsl-2.7.1
            ./configure --prefix=/usr/local
            make
            make install
            
            # Go back to the root directory to build FFTW
            cd ..
            
            # Build FFTW from source
            curl -O http://www.fftw.org/fftw-3.3.10.tar.gz
            tar -xzf fftw-3.3.10.tar.gz
            cd fftw-3.3.10
            ./configure --prefix=/usr/local --enable-shared
            make
            make install
            
            # Print to check the files are correctly installed
            echo "Contents of /usr/local/include/gsl:"
            ls -la /usr/local/include/gsl/
            
            echo "Contents of /usr/local/include:"
            ls -la /usr/local/include/
            
            echo "Contents of /usr/local/lib:"
            ls -la /usr/local/lib/

        run: |
          # Check GSL library and include files
          if [ -f /usr/lib/x86_64-linux-gnu/libgsl.so ]; then
            echo "GSL library found in /usr/lib/x86_64-linux-gnu/"
          else
            echo "GSL library not found in /usr/lib/x86_64-linux-gnu/"; exit 1;
          fi
          
          if [ -f /usr/include/gsl/gsl_sf_bessel.h ]; then
            echo "GSL include files found in /usr/include/gsl/"
          else
            echo "GSL include files not found in /usr/include/gsl/"; exit 1;
          fi
          
          # Check FFTW library and include files
          if [ -f /usr/lib/x86_64-linux-gnu/libfftw3.so ]; then
            echo "FFTW library found in /usr/lib/x86_64-linux-gnu/"
          else
            echo "FFTW library not found in /usr/lib/x86_64-linux-gnu/"; exit 1;
          fi
          
          if [ -f /usr/include/fftw3.h ]; then
            echo "FFTW include files found in /usr/include/"
          else
            echo "FFTW include files not found in /usr/include/"; exit 1;
          fi
          
          python -m cibuildwheel --output-dir wheelhouse

      - name: Install dependencies on macOS
        if: matrix.os == 'macos-latest'
        run: |
          brew install gsl fftw libomp
          chmod +x select_makefile.sh
          ./select_makefile.sh
          make clean

            # Check that omp.h is available in the include directory
          if [ -f /opt/homebrew/opt/libomp/include/omp.h ]; then
            echo "omp.h found"
          else
            echo "omp.h not found" && exit 1
          fi

            # Check that gsl_integration.h and fftw3.h are available
          if [ -f /opt/homebrew/opt/gsl/include/gsl/gsl_integration.h ]; then
            echo "gsl_integration.h found"
          else
            echo "gsl_integration.h not found" && exit 1
          fi
          
          if [ -f /opt/homebrew/opt/fftw/include/fftw3.h ]; then
            echo "fftw3.h found"
          else
            echo "fftw3.h not found" && exit 1
          fi


          export LIBRARY_PATH=/opt/homebrew/opt/libomp/lib:$LIBRARY_PATH
          export C_INCLUDE_PATH=/opt/homebrew/opt/libomp/include:$C_INCLUDE_PATH
          export DYLD_LIBRARY_PATH=/opt/homebrew/opt/libomp/lib:$DYLD_LIBRARY_PATH # (Mac M1 users only)
        working-directory: class-sz
          
      # Build wheels for macOS (with Apple Silicon support)
      - name: Build wheels for macOS
        if: matrix.os == 'macos-latest'
        env:
          CIBW_BUILD: "cp39-macosx_arm64"  # Restrict to cp39-macosx_arm64
          CIBW_ARCHS: "arm64"
          LDFLAGS: "-L/opt/homebrew/opt/libomp/lib -L/opt/homebrew/opt/gsl/lib -L/opt/homebrew/opt/fftw/lib"
          CPPFLAGS: "-I/opt/homebrew/opt/libomp/include -I/opt/homebrew/opt/gsl/include -I/opt/homebrew/opt/fftw/include"
          LIBRARY_PATH: "/opt/homebrew/opt/libomp/lib:/opt/homebrew/opt/gsl/lib:/opt/homebrew/opt/fftw/lib:$LIBRARY_PATH"
          C_INCLUDE_PATH: "/opt/homebrew/opt/libomp/include:/opt/homebrew/opt/gsl/include:/opt/homebrew/opt/fftw/include:$C_INCLUDE_PATH"
          DYLD_LIBRARY_PATH: "/opt/homebrew/opt/libomp/lib:/opt/homebrew/opt/gsl/lib:/opt/homebrew/opt/fftw/lib:$DYLD_LIBRARY_PATH"

        run: python -m cibuildwheel --output-dir wheelhouse



      - name: Install dependencies for source distribution
        run: |
          python -m pip install build Cython numpy classy_szfast

      - name: Build source distribution (sdist)
        run: python -m build --sdist --outdir dist

      - name: Upload built distributions (wheels and sdist)
        uses: actions/upload-artifact@v4
        with:
          name: wheels-and-sdist-${{ matrix.os }}-${{ matrix.python-version }}
          path: |
            wheelhouse/*.whl
            dist/*.tar.gz

      - name: Install the built wheel
        run: |
          python -m pip install wheelhouse/*.whl

      - name: Check import of classy_sz
        run: |
          python -c "import classy_sz; print('classy_sz imported successfully')"


  publish_wheels:
    runs-on: ubuntu-latest
    needs: build_wheels
    strategy:
      matrix:
        os: [ubuntu-latest,macos-latest]
        python-version: ["3.9"]
        
    steps:
      - name: Checkout the code
        uses: actions/checkout@v4

      - name: Download built wheels and sdist
        uses: actions/download-artifact@v4
        with:
          name: wheels-and-sdist-${{ matrix.os }}-${{ matrix.python-version }}
          path: wheels-and-sdist-${{ matrix.os }}-${{ matrix.python-version }}


      - name: Install dependencies for uploading
        run: python -m pip install -U pip twine

      - name: Upload distributions to PyPI
        run: |
          ls
          ls -R wheels-and-sdist-${{ matrix.os }}-${{ matrix.python-version }}
          mkdir -p wheelhouse dist
          if [ -d "wheels-and-sdist-${{ matrix.os }}-${{ matrix.python-version }}/wheelhouse" ]; then
            mv wheels-and-sdist-${{ matrix.os }}-${{ matrix.python-version }}/wheelhouse/* wheelhouse/
          fi
          if [ -d "wheels-and-sdist-${{ matrix.os }}-${{ matrix.python-version }}/dist" ]; then
            mv wheels-and-sdist-${{ matrix.os }}-${{ matrix.python-version }}/dist/* dist/
          fi
      
          if [ "$(ls -A wheelhouse)" ]; then
            echo "Uploading wheels..."
            twine upload wheelhouse/*
          else
            echo "No wheels to upload."
          fi

          if [ -d "dist" ] && [ "$(ls -A dist)" ]; then
            echo "Uploading source distribution to PyPI..."
            twine upload dist/*.tar.gz || echo "Source distribution upload failed, probably cause it's already there continuing..."
          else
            echo "No source distribution to upload."
          fi

        env:
          TWINE_USERNAME: ${{ secrets.PYPI_USERNAME }}
          TWINE_PASSWORD: ${{ secrets.PYPI_PASSWORD }}