diff --git a/requirements.packages.txt b/requirements.packages.txt
deleted file mode 100644
index 6383989cb..000000000
--- a/requirements.packages.txt
+++ /dev/null
@@ -1,210 +0,0 @@
-alembic==1.10.4
-amqp==5.2.0
-aniso8601==9.0.1
-appdirs==1.4.4
-arrow==0.17.0
-asttokens==2.4.1
-async-timeout==4.0.3
-attrs==23.2.0
-Babel==2.15.0
-base32-lib==1.0.2
-beautifulsoup4==4.12.3
-billiard==3.6.4.0
-bleach==6.1.0
-blinker==1.8.2
-cachelib==0.9.0
-cairocffi==1.7.1
-CairoSVG==1.0.22
-celery==5.2.7
-certifi==2024.7.4
-cffi==1.16.0
-charset-normalizer==3.3.2
-click==8.1.7
-click-default-group==1.2.4
-click-didyoumean==0.3.1
-click-plugins==1.1.1
-click-repl==0.3.0
-commonmark==0.9.1
-counter-robots==2018.6
-cryptography==42.0.8
-datacite==1.2.0
-dcxml==0.1.1
-decorator==5.1.1
-defusedxml==0.7.1
-Deprecated==1.2.14
-dictdiffer==0.9.0
-dnspython==2.6.1
-dojson==1.5.0
-email_validator==2.2.0
-Events==0.5
-exceptiongroup==1.2.2
-executing==2.0.1
-fastjsonschema==2.20.0
-Flask==2.2.5
-Flask-Admin==1.6.1
-Flask-Alembic==2.0.1
-flask-babel==4.0.0
-Flask-Breadcrumbs==0.5.1
-Flask-Caching==2.3.0
-Flask-CeleryExt==0.5.0
-Flask-Collect-Invenio==1.4.0
-Flask-Cors==4.0.1
-flask-iiif==1.0.0
-Flask-KVSession-Invenio==0.6.3
-Flask-Limiter==2.9.2
-Flask-Login==0.6.3
-Flask-Mail==0.9.1
-flask-menu==1.0.1
-Flask-OAuthlib==0.9.6
-Flask-Principal==0.4.0
-Flask-RESTful==0.3.10
-Flask-Security-Invenio==3.3.3
-flask-shell-ipython==0.5.1
-Flask-SQLAlchemy==2.5.1
-flask-talisman==0.8.1
-flask-webpackext==1.0.2
-Flask-WTF==1.2.1
-fs==2.4.16
-ftfy==6.2.0
-future==1.0.0
-github3.py==4.0.1
-greenlet==3.0.3
-idna==3.7
-IDUtils==1.4.2
-importlib_metadata==8.0.0
-importlib_resources==6.4.0
-infinity==1.5
-intervals==0.9.2
-invenio-access==2.0.0
-invenio-accounts==5.0.1
-invenio-admin==1.5.0
-invenio-app==1.5.0
-invenio-assets==3.0.3
-invenio-base==1.4.0
-invenio-cache==1.3.0
-invenio-celery==1.3.1
-invenio-config==1.0.4
-invenio-db==1.1.5
-invenio-files-rest==2.2.0
-invenio-formatter==2.0.3
-invenio-i18n==2.1.1
-invenio-iiif==1.2.0
-invenio-indexer==2.3.0
-invenio-jsonschemas==1.1.4
-invenio-logging==2.1.1
-invenio-mail==2.1.1
-invenio-oaiserver==2.2.1
-invenio-oauth2server==2.3.1
-invenio-oauthclient==3.5.1
-invenio-opendefinition==2.0.0a2
-invenio-pages==1.0.0a7
-invenio-pidstore==1.3.1
-invenio-previewer==2.2.1
-invenio-queues==1.0.1
-invenio-records==2.3.0
-invenio-records-files==1.2.1
-invenio-records-rest==2.4.1
-invenio-records-ui==1.2.1
-invenio-rest==1.3.1
-invenio-search==2.4.1
-invenio-search-ui==2.8.7
-invenio-sequencegenerator==1.0.0a3
-invenio-stats==4.1.0
-invenio-theme==3.2.0
-invenio-userprofiles==1.2.5
-ipython==8.18.1
-isbnid==0.4.6
-itsdangerous==2.0.1
-jedi==0.19.1
-Jinja2==3.1.4
-jsmin==3.0.1
-jsonpatch==1.33
-jsonpointer==3.0.0
-jsonref==1.1.0
-jsonresolver==0.3.2
-jsonschema==4.9.1
-jupyter_client==8.6.2
-jupyter_core==5.7.2
-jupyterlab_pygments==0.3.0
-kombu==5.3.7
-limits==3.13.0
-lxml==5.2.2
-lxml_html_clean==0.1.1
-Mako==1.3.5
-MarkupSafe==2.1.5
-marshmallow==3.21.3
-matplotlib-inline==0.1.7
-maxminddb==2.6.2
-maxminddb-geolite2==2018.703
-mistune==3.0.2
-msgpack==1.0.8
-nbclient==0.10.0
-nbconvert==7.16.4
-nbformat==5.10.4
-oauthlib==2.1.0
-opensearch-dsl==2.1.0
-opensearch-py==2.6.0
-ordered-set==4.1.0
-packaging==24.1
-pandocfilters==1.5.1
-parso==0.8.4
-passlib==1.7.4
-pexpect==4.9.0
-pillow==10.4.0
-platformdirs==4.2.2
-pluggy==0.13.1
-prompt_toolkit==3.0.47
-psycopg2-binary==2.9.9
-ptyprocess==0.7.0
-pure-eval==0.2.2
-pyasn1==0.6.0
-pyasn1_modules==0.4.0
-pycountry==22.3.5
-pycparser==2.22
-Pygments==2.18.0
-PyJWT==2.8.0
-pynpm==0.2.0
-pyrsistent==0.20.0
-python-dateutil==2.9.0.post0
-python-geoip==1.2
-python-ldap==3.4.4
-pytz==2024.1
-pywebpack==2.0.0
-pyzmq==26.0.3
-redis==5.0.7
-requests==2.32.3
-requests-oauthlib==1.1.0
-requests-toolbelt==1.0.0
-rich==12.6.0
-sentry-sdk==1.45.0
-simplejson==3.19.2
-simplekv==0.14.1
-six==1.16.0
-soupsieve==2.5
-speaklater==1.3
-SQLAlchemy==1.4.52
-SQLAlchemy-Continuum==1.4.1
-SQLAlchemy-Utils==0.38.3
-stack-data==0.6.3
-tinycss2==1.3.0
-tornado==6.4.1
-traitlets==5.14.3
-typing_extensions==4.12.2
-ua-parser==0.18.0
-uritemplate==4.1.1
-uritemplate.py==1.0.1
-uritools==4.0.3
-urllib3==1.26.19
-validators==0.33.0
-vine==5.1.0
-Wand==0.6.13
-watchdog==2.2.1
-wcwidth==0.2.13
-webargs==5.5.3
-webencodings==0.5.1
-Werkzeug==2.2.3
-wrapt==1.16.0
-WTForms==2.3.3
-WTForms-Alchemy==0.18.0
-WTForms-Components==0.10.5
-zipp==3.19.2
diff --git a/requirements.txt b/requirements.txt
index 99b95bc32..06df718df 100644
--- a/requirements.txt
+++ b/requirements.txt
@@ -3,9 +3,9 @@ amqp==5.3.1
 aniso8601==9.0.1
 appdirs==1.4.4
 arrow==0.17.0
-asttokens==2.4.1
+asttokens==3.0.0
 async-timeout==5.0.1
-attrs==24.2.0
+attrs==24.3.0
 babel==2.16.0
 base32-lib==1.0.2
 beautifulsoup4==4.12.3
@@ -16,7 +16,7 @@ cachelib==0.9.0
 cairocffi==1.7.1
 CairoSVG==1.0.22
 celery==5.3.6
-certifi==2024.8.30
+certifi==2024.12.14
 cffi==1.17.1
 charset-normalizer==3.4.0
 click==8.1.7
@@ -26,7 +26,7 @@ click-plugins==1.1.1
 click-repl==0.3.0
 commonmark==0.9.1
 counter-robots==2018.6
-cryptography==43.0.3
+cryptography==44.0.0
 datacite==1.2.0
 dcxml==0.1.1
 decorator==5.1.1
@@ -40,7 +40,7 @@ email_validator==2.2.0
 Events==0.5
 exceptiongroup==1.2.2
 executing==2.1.0
-fastjsonschema==2.20.0
+fastjsonschema==2.21.1
 Flask==2.2.5
 Flask-Admin==1.6.1
 Flask-Alembic==2.0.1
@@ -50,8 +50,8 @@ Flask-Caching==2.3.0
 Flask-CeleryExt==0.5.0
 Flask-Collect-Invenio==1.4.0
 Flask-Cors==5.0.0
-flask-iiif==1.1.1
-Flask-KVSession-Invenio==0.6.3
+flask-iiif==1.2.0
+Flask-KVSession-Invenio==0.6.4
 Flask-Limiter==2.9.2
 Flask-Login==0.6.3
 Flask-Mail==0.9.1
@@ -59,11 +59,11 @@ flask-menu==1.0.1
 Flask-OAuthlib==0.9.6
 Flask-Principal==0.4.0
 Flask-RESTful==0.3.10
-Flask-Security-Invenio==3.3.3
+Flask-Security-Invenio==3.4.0
 flask-shell-ipython==0.5.3
 Flask-SQLAlchemy==2.5.1
 flask-talisman==0.8.1
-flask-webpackext==1.0.2
+flask-webpackext==2.0.0
 Flask-WTF==1.2.2
 fs==2.4.16
 ftfy==6.3.1
@@ -77,41 +77,41 @@ importlib_resources==6.4.5
 infinity==1.5
 intervals==0.9.2
 invenio-access==2.1.0
-invenio-accounts==5.1.5
+invenio-accounts==5.1.7
 invenio-admin==1.5.1
-invenio-app==1.5.0
-invenio-assets==3.0.3
+invenio-app==1.5.1
+invenio-assets==3.1.0
 invenio-base==1.4.0
-invenio-cache==1.3.0
-invenio-celery==1.3.1
+invenio-cache==1.3.1
+invenio-celery==1.3.2
 invenio-config==1.0.4
 invenio-db==1.3.1
-invenio-files-rest==2.2.2
-invenio-formatter==2.0.3
-invenio-i18n==2.1.2
+invenio-files-rest==2.2.4
+invenio-formatter==2.0.4
+invenio-i18n==2.2.0
 invenio-iiif==1.2.0
 invenio-indexer==2.4.0
-invenio-jsonschemas==1.1.4
-invenio-logging==2.1.1
+invenio-jsonschemas==1.1.5
+invenio-logging==2.1.4
 invenio-mail==2.1.1
-invenio-oaiserver==2.2.3
-invenio-oauth2server==2.4.0
+invenio-oaiserver==2.3.0
+invenio-oauth2server==2.3.1
 invenio-oauthclient==3.5.1
 invenio-opendefinition==2.0.0a2
 invenio-pages==1.0.0a7
-invenio-pidstore==1.3.2
-invenio-previewer==2.2.1
+invenio-pidstore==1.3.4
+invenio-previewer==2.2.2
 invenio-queues==1.0.1
 invenio-records==2.4.1
 invenio-records-files==1.2.1
 invenio-records-rest==2.4.1
-invenio-records-ui==1.2.1
-invenio-rest==1.3.1
+invenio-records-ui==1.2.2
+invenio-rest==1.5.0
 invenio-search==2.4.1
 invenio-search-ui==2.9.1
 invenio-sequencegenerator==1.0.0a3
-invenio-stats==4.2.0
-invenio-theme==3.5.0
+invenio-stats==4.2.1
+invenio-theme==3.5.2
 invenio-userprofiles==1.2.5
 ipython==8.18.1
 isbnlib==3.10.14
@@ -128,10 +128,10 @@ jupyter_client==8.6.3
 jupyter_core==5.7.2
 jupyterlab_pygments==0.3.0
 kombu==5.4.2
-limits==3.13.0
+limits==3.14.1
 lxml==5.3.0
 lxml_html_clean==0.4.1
-Mako==1.3.6
+Mako==1.3.8
 MarkupSafe==3.0.2
 marshmallow==3.23.1
 matplotlib-inline==0.1.7
@@ -139,12 +139,12 @@ maxminddb==2.6.2
 maxminddb-geolite2==2018.703
 mistune==3.0.2
 msgpack==1.1.0
-nbclient==0.10.0
+nbclient==0.10.1
 nbconvert==7.16.4
 nbformat==5.10.4
 oauthlib==2.1.0
 opensearch-dsl==2.1.0
-opensearch-py==2.7.1
+opensearch-py==2.8.0
 ordered-set==4.1.0
 packaging==24.2
 pandocfilters==1.5.1
@@ -152,7 +152,7 @@ parso==0.8.4
 passlib==1.7.4
 pexpect==4.9.0
 pillow==11.0.0
-platformdirs==4.2.0
+platformdirs==4.3.6
 pluggy==0.13.1
 prompt_toolkit==3.0.48
 psycopg2-binary==2.9.10
@@ -163,16 +163,16 @@ pyasn1_modules==0.4.1
 pycountry==22.3.5
 pycparser==2.22
 Pygments==2.18.0
-PyJWT==2.10.0
+PyJWT==2.10.1
 pynpm==0.2.0
 pyrsistent==0.20.0
 python-dateutil==2.9.0.post0
 python-geoip==1.2
 python-ldap==3.4.4
-pytz==2024.2
-pywebpack==2.0.1
+pytz==2024.1
+pywebpack==2.1.0
 pyzmq==26.2.0
-redis==5.2.0
+redis==5.2.1
 requests==2.32.3
 requests-oauthlib==1.1.0
 requests-toolbelt==1.0.0
@@ -180,7 +180,7 @@ rich==12.6.0
 sentry-sdk==1.45.1
 simplejson==3.19.3
 simplekv==0.14.1
-six==1.15.0
+six==1.17.0
 soupsieve==2.6
 speaklater==1.3
 SQLAlchemy==1.4.54
@@ -188,10 +188,12 @@ SQLAlchemy-Continuum==1.4.1
 SQLAlchemy-Utils==0.38.3
 stack-data==0.6.3
 tinycss2==1.4.0
-tornado==6.4.1
+tornado==6.4.2
 traitlets==5.14.3
 typing_extensions==4.12.2
-ua-parser==0.18.0
+tzdata==2024.2
+ua-parser==1.0.0
+ua-parser-builtins==0.18.0.post1
 uritemplate==4.1.1
 uritemplate.py==1.0.1
 uritools==4.0.3
@@ -204,8 +206,8 @@ wcwidth==0.2.13
 webargs==5.5.3
 webencodings==0.5.1
 Werkzeug==2.2.3
-wrapt==1.16.0
-WTForms==3.1.2
+wrapt==1.17.0
+WTForms==2.3.3
 WTForms-Alchemy==0.18.0
-WTForms-Components==0.11.0
+WTForms-Components==0.10.5
 zipp==3.21.0
diff --git a/setup.cfg b/setup.cfg
index a504b059d..7e2567e66 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -1,7 +1,7 @@
 # -*- coding: utf-8 -*-
 #
 # This file is part of CDS.
-# Copyright (C) 2015, 2016 CERN.
+# Copyright (C) 2024 CERN.
 #
 # CDS is free software; you can redistribute it
 # and/or modify it under the terms of the GNU General Public License as
@@ -48,47 +48,48 @@ include_package_data = True
 python_requires = >=3.9
 install_requires =
     # Invenio core modules
-    invenio-app>=1.5.0,<1.6.0
-    # upper pinned to minor due to flask 2.3 upgrade changes dependencies
+    invenio-app>=1.5.0,<2.0.0
     invenio-base>=1.3.0,<2.0.0
     invenio-cache>=1.1.1,<2.0.0
     invenio-celery>=1.3.0,<2.0.0
-    invenio-config>=1.0.3,<1.1.0
+    invenio-config>=1.0.3,<2.0.0
     invenio-i18n>=2.0.0,<3.0.0
     invenio-db[postgresql]>=1.1.0,<2.0.0
     invenio-search[opensearch2]>=2.4.1,<3.0.0
     # Invenio base bundle
-    invenio-admin>=1.5.0,<1.6.0
+    invenio-admin>=1.5.0,<2.0.0
     invenio-assets>=3.0.0,<4.0.0
     invenio-formatter>=2.0.0,<3.0.0
-    invenio-logging[sentry_sdk]>=2.0.0,<3.0.0
+    invenio-logging>=2.0.0,<3.0.0
     invenio-mail>=2.0.0,<3.0.0
-    invenio-rest>=1.3.0,<1.4.0
+    invenio-rest>=1.5.0,<2.0.0
     invenio-theme>=3.0.0,<4.0.0
     # Invenio auth bundle"
     invenio-access>=2.0.0,<3.0.0
     invenio-accounts>=5.0.0,<6.0.0
     invenio-oauth2server>=2.0.0,<3.0.0
     invenio-oauthclient>=3.0.0,<4.0.0
-    invenio-userprofiles>=1.2.4,<1.3.0
+    invenio-userprofiles>=1.2.4,<2.0.0
     # Invenio metadata bundle
     invenio-indexer>=2.2.0,<3.0.0
-    invenio-jsonschemas>=1.1.4,<1.2.0
-    invenio-oaiserver>=2.2.0,<2.3.0
-    invenio-pidstore>=1.3.0,<1.4.0
+    invenio-jsonschemas>=1.1.4,<2.0.0
+    invenio-oaiserver>=2.2.0,<3.0.0
+    invenio-pidstore>=1.3.0,<2.0.0
     invenio-records-rest>=2.2.0,<3.0.0
     invenio-records>=2.2.1,<3.0.0
-    invenio-records-ui>=1.2.1,<1.3.0
+    invenio-records-ui>=1.2.1,<2.0.0
     invenio-search-ui>=2.4.0,<3.0.0
     # Invenio files bundle, with only invenio-files-rest"
     invenio-files-rest>=2.0.0,<3.0.0
     invenio-records-files>=1.2.1,<2.0.0
-    invenio-iiif>=1.2.0,<1.3.0,
-    # Extra deps of Videos,
+    invenio-iiif>=1.2.0,<2.0.0
+    # Extra deps of Videos
     invenio-opendefinition>=2.0.0a2,<3.0.0
     invenio-pages>=1.0.0a7,<2.0.0
     invenio-previewer>=2.2.0,<3.0.0
     invenio-stats>=4.0.0,<5.0.0
+    # sentry-sdk removed from invenio-logging
+    sentry-sdk[flask]>=1.0.0,<2.0.0
     pycountry>=20.0.0,<23.0.0
     # needed to have namedtuple json serialized as dict
     simplejson>=3.8.1,<4.0.0
@@ -102,6 +103,9 @@ install_requires =
     # Pinned due to before_first_request deprecation https://flask.palletsprojects.com/en/2.2.x/api/#flask.Flask.before_first_request
     Flask>=2.2.0,<2.3.0
     Werkzeug>=2.2.0,<2.3.0
+    flask_menu>=1.0.0,<2.0.0
+    # 3.0.0 introduces breaking changes, requires fixes in flask-admin
+    WTForms<3.0.0
     # extras
     arrow>=0.7.0,<1.0.0
     CairoSVG>=1.0.20,<2.0.0