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stub run local & on github actions hangs indefinitely #171

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kelly-sovacool opened this issue Jan 18, 2024 · 1 comment
Open

stub run local & on github actions hangs indefinitely #171

kelly-sovacool opened this issue Jan 18, 2024 · 1 comment
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@kelly-sovacool
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The stub run hangs after completion -- nextflow doesn't recognize the processes are all done. This happens on github actions and locally. Doesn't happen on biowulf with lots of memory.

cd tests/cli
champagne init
champagne run -stub -c ci_stub.config --max_cpus 2 --max_memory 6.GB
@kelly-sovacool
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the action might hang if it runs out of memory actions/runner#1326 (comment)

kelly-sovacool added a commit that referenced this issue Jan 18, 2024
@kelly-sovacool kelly-sovacool self-assigned this Jan 23, 2024
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