Pytest update #39
Workflow file for this run
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name: spare_scores test cases on macos | |
# workflow dispatch has been added for testing purposes | |
on: [push, pull_request, workflow_dispatch] | |
jobs: | |
build: | |
runs-on: ["macos-latest"] | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: "3.8" | |
- name: Set-up miniconda for macos and ubuntu | |
uses: conda-incubator/setup-miniconda@v2 | |
with: | |
auto-update-conda: true | |
python-version: 3.8 | |
miniconda-version: "latest" | |
- name: Create conda env | |
run: conda create -n spare python=3.8 | |
- name: Install pip | |
run: conda run -n spare conda install pip | |
- name: Install spare scores | |
run: | | |
pip install setuptools twine wheel | |
python setup.py bdist_wheel | |
cd dist | |
WHEEL_FILE=$(ls spare_scores*) | |
pip install "$WHEEL_FILE" | |
- name: Download dependencies | |
run: pip install setuptools && pip install . | |
- name: Run unit tests | |
run: | | |
cd tests/unit && python -m unittest discover -s . -p "*.py" | |
- name: Generate Coverage Report | |
run: | | |
pip install pytest | |
pip install pytest-cov | |
cd tests/unit && python3 -m pytest --cov=../../ --cov-report=xml | |
- name: Upload Coverage to Codecov | |
uses: codecov/[email protected] | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
slug: CBICA/spare_score |