From f8692ea320e276be287cb95365ef8a394904a1ae Mon Sep 17 00:00:00 2001 From: czma Date: Fri, 25 Sep 2020 16:45:57 -0500 Subject: [PATCH] adding files to replicate Figure 2A results in paper --- Paper_Inputs/.DS_Store | Bin 0 -> 6148 bytes Paper_Inputs/README.md | 50 +++++ Paper_Inputs/S11_TF_labels.csv | 50 +++++ Paper_Inputs/S11_TF_mRNA_in_ZEV.csv | 50 +++++ ...ues_optimized_with_ChIP-PC-TFKO_on_ZEV.csv | 50 +++++ Paper_Inputs/S12_TF_labels.csv | 50 +++++ Paper_Inputs/S12_TF_mRNA_in_TFKO.csv | 50 +++++ ...ues_optimized_with_ChIP-PC-ZEV_on_TFKO.csv | 50 +++++ Paper_Inputs/S17_TF_labels.csv | 50 +++++ ...alues_optimized_with_DE-PC-TFKO_on_ZEV.csv | 50 +++++ Paper_Inputs/S18_TF_labels.csv | 50 +++++ ...alues_optimized_with_DE-PC-ZEV_on_TFKO.csv | 50 +++++ Paper_Inputs/S23_TF_labels.csv | 50 +++++ ...lues_optimized_with_PWM-PC-TFKO_on_ZEV.csv | 50 +++++ Paper_Inputs/S24_TF_labels.csv | 50 +++++ ...lues_optimized_with_PWM-PC-ZEV_on_TFKO.csv | 50 +++++ Paper_Inputs/S5_TF_labels.csv | 50 +++++ Paper_Inputs/S5_TF_mRNA_in_ZEV.csv | 50 +++++ ...ues_optimized_with_ChIP-CC-TFKO_on_ZEV.csv | 50 +++++ Paper_Inputs/S6_TF_labels.csv | 50 +++++ Paper_Inputs/S6_TF_mRNA_in_TFKO.csv | 50 +++++ ...ues_optimized_with_ChIP-CC-ZEV_on_TFKO.csv | 50 +++++ Paper_Inputs/sample_labels.csv | 180 ++++++++++++++++++ 23 files changed, 1230 insertions(+) create mode 100644 Paper_Inputs/.DS_Store create mode 100644 Paper_Inputs/README.md create mode 100644 Paper_Inputs/S11_TF_labels.csv create mode 100644 Paper_Inputs/S11_TF_mRNA_in_ZEV.csv create mode 100644 Paper_Inputs/S11_unlabeled_50-TF_TFA_values_optimized_with_ChIP-PC-TFKO_on_ZEV.csv create mode 100644 Paper_Inputs/S12_TF_labels.csv create mode 100644 Paper_Inputs/S12_TF_mRNA_in_TFKO.csv create mode 100644 Paper_Inputs/S12_unlabeled_50-TF_TFA_values_optimized_with_ChIP-PC-ZEV_on_TFKO.csv create mode 100644 Paper_Inputs/S17_TF_labels.csv create mode 100644 Paper_Inputs/S17_unlabeled_50-TF_TFA_values_optimized_with_DE-PC-TFKO_on_ZEV.csv create mode 100644 Paper_Inputs/S18_TF_labels.csv create mode 100644 Paper_Inputs/S18_unlabeled_50-TF_TFA_values_optimized_with_DE-PC-ZEV_on_TFKO.csv create mode 100644 Paper_Inputs/S23_TF_labels.csv create mode 100644 Paper_Inputs/S23_unlabeled_50-TF_TFA_values_optimized_with_PWM-PC-TFKO_on_ZEV.csv create mode 100644 Paper_Inputs/S24_TF_labels.csv create mode 100644 Paper_Inputs/S24_unlabeled_50-TF_TFA_values_optimized_with_PWM-PC-ZEV_on_TFKO.csv create mode 100644 Paper_Inputs/S5_TF_labels.csv create mode 100644 Paper_Inputs/S5_TF_mRNA_in_ZEV.csv create mode 100644 Paper_Inputs/S5_unlabeled_50-TF_TFA_values_optimized_with_ChIP-CC-TFKO_on_ZEV.csv create mode 100644 Paper_Inputs/S6_TF_labels.csv create mode 100644 Paper_Inputs/S6_TF_mRNA_in_TFKO.csv create mode 100644 Paper_Inputs/S6_unlabeled_50-TF_TFA_values_optimized_with_ChIP-CC-ZEV_on_TFKO.csv create mode 100644 Paper_Inputs/sample_labels.csv diff --git a/Paper_Inputs/.DS_Store b/Paper_Inputs/.DS_Store new file mode 100644 index 0000000000000000000000000000000000000000..5008ddfcf53c02e82d7eee2e57c38e5672ef89f6 GIT binary patch literal 6148 zcmeH~Jr2S!425mzP>H1@V-^m;4Wg<&0T*E43hX&L&p$$qDprKhvt+--jT7}7np#A3 zem<@ulZcFPQ@L2!n>{z**++&mCkOWA81W14cNZlEfg7;MkzE(HCqgga^y>{tEnwC%0;vJ&^%eQ zLs35+`xjp>T0