diff --git a/bluepysnap/circuit_validation.py b/bluepysnap/circuit_validation.py index f7af2b07..0040e412 100644 --- a/bluepysnap/circuit_validation.py +++ b/bluepysnap/circuit_validation.py @@ -2,6 +2,7 @@ The idea here is to not depend on libsonata if possible, so we can use this in all situations """ + import logging from pathlib import Path diff --git a/bluepysnap/cli.py b/bluepysnap/cli.py index be6d1307..669e8172 100644 --- a/bluepysnap/cli.py +++ b/bluepysnap/cli.py @@ -1,4 +1,5 @@ """The project's command line launcher.""" + import functools import logging diff --git a/bluepysnap/query.py b/bluepysnap/query.py index 079b62c5..eed9a3c3 100644 --- a/bluepysnap/query.py +++ b/bluepysnap/query.py @@ -1,4 +1,5 @@ """Module to process search queries of nodes/edges.""" + import operator from collections.abc import Mapping from copy import deepcopy diff --git a/bluepysnap/schemas/__init__.py b/bluepysnap/schemas/__init__.py index 62cb5d4c..0df785bd 100644 --- a/bluepysnap/schemas/__init__.py +++ b/bluepysnap/schemas/__init__.py @@ -1,4 +1,5 @@ """Schemas and schema parser.""" + from bluepysnap.schemas.schemas import ( validate_circuit_schema, validate_edges_schema, diff --git a/bluepysnap/schemas/schemas.py b/bluepysnap/schemas/schemas.py index 222ee90b..1531b6aa 100644 --- a/bluepysnap/schemas/schemas.py +++ b/bluepysnap/schemas/schemas.py @@ -1,4 +1,5 @@ """Functions for schema based validation of circuit files.""" + from pathlib import Path import h5py diff --git a/bluepysnap/simulation_validation.py b/bluepysnap/simulation_validation.py index 6f8b217f..63a23aa8 100644 --- a/bluepysnap/simulation_validation.py +++ b/bluepysnap/simulation_validation.py @@ -1,4 +1,5 @@ """Standalone module that validates Sonata simulation. See ``validate-simulation`` function.""" + import contextlib import io import os diff --git a/tests/data/reporting/create_reports.py b/tests/data/reporting/create_reports.py index 401ec433..761da564 100644 --- a/tests/data/reporting/create_reports.py +++ b/tests/data/reporting/create_reports.py @@ -1,4 +1,5 @@ """Taken from the libsonata lib.""" + import h5py import numpy as np