2.3.9

What's Changed

• Add reader for LCCR csv by @ilkilic in #166

Full Changelog: 2.3.8...2.3.9

2.3.8

What's Changed

• Refactor 'amp' and 'hypamp' variables in Step for correct unit conversion by @ilkilic in #167

Full Changelog: 2.3.7...2.3.8

2.3.7

What's Changed

• Make BluePyEfe compatible with numpy2 by @AurelienJaquier in #165

Full Changelog: 2.3.6...2.3.7

2.3.6

What's Changed

• Add a new test for sAHP extraction by @AurelienJaquier in #163

Full Changelog: 2.3.5...2.3.6

2.3.5

What's Changed

• Fix bug in protocol.py by @AurelienJaquier in #162

Full Changelog: 2.3.4...2.3.5

2.3.4

What's Changed

• ecodes with amp2 output fix by @AurelienJaquier in #161

Full Changelog: 2.3.3...2.3.4

2.3.3

What's Changed

• Force evaluation for built-in map() by @ilkilic in #160

New Contributors

• @ilkilic made their first contribution in #160

Full Changelog: 2.3.2...2.3.3

2.3.2

What's Changed

• modify step threshold in step detection of sAHP by @AurelienJaquier in #159

Full Changelog: 2.3.1...2.3.2

2.3.1

What's Changed

• enable syntax check in tox by default by @anilbey in #113
• Adds the ability to extract for absolute amplitude in addition to by @DrTaDa in #114
• Minor bug by @DrTaDa in #115
• Explicit the value used as a default for the standard deviation by @DrTaDa in #117
• Add default std values to current extraction by @DrTaDa in #118
• force numpy<1.24 until igor is updated by @AurelienJaquier in #119
• Fix 'keep alive' workflow and tox4 fix by @AurelienJaquier in #116
• Attempt at fixing auto-threshold by @DrTaDa in #120
• Improve the ticks markign the spikes in the plotting of the recordings by @DrTaDa in #121
• Add python 3.11 tests to github workflow by @AurelienJaquier in #123
• Add step detection to sAHP by @DrTaDa in #124
• Add stimulus representation in ecode docstrings by @AurelienJaquier in #125
• Fix sahp step detection by @DrTaDa in #126
• Display the auto-threshold when plotting a recording by @DrTaDa in #127
• Use maintained igor2 instead of unmaintained igor by @AurelienJaquier in #128
• Fix step detection by @AurelienJaquier in #129
• Recording: extract set_autothreshold as a method by @anilbey in #131
• Fix annyoing numpy warning by @arnaudon in #134
• Update README.md: fix broken link to ipynb by @anilbey in #135
• add parallel plotting by @arnaudon in #132
• Also pickles the targets/protocols by @DrTaDa in #137
• Fix smoothing for current amplitude detection by @arnaudon in #139
• adding spontaneous in ecode init by @darshanmandge in #141
• Add multi_stim_start and multi_stim_end to the efel_settings when by @DrTaDa in #142
• Use record auto_threshold when it is actually used by @DrTaDa in #145
• remove spaced from units in igor_reader by @DrTaDa in #146
• Refactor nwb reader by @DrTaDa in #143
• Fixed error bar plot and add holding current to the recording plots by @DrTaDa in #147
• Fix typos in example notebooks by @pitmonticone in #148
• update branch of gh-action-pypi-publish action by @AurelienJaquier in #150
• Turn readme from .md into .rst by @AurelienJaquier in #151
• use sphinx theme and README in documentation by @AurelienJaquier in #152
• add readthedocs.yml file by @AurelienJaquier in #153
• fix conf.py path in .readthedocs.yml by @AurelienJaquier in #154
• Make readthedocs install bluepyefe by @AurelienJaquier in #155
• Readthedocs install by @AurelienJaquier in #156
• add gh workflow to sync to ebrains mirror at each push by @AurelienJaquier in #157
• tag and release at each push to master by @AurelienJaquier in #158

New Contributors

• @arnaudon made their first contribution in #134
• @darshanmandge made their first contribution in #141
• @pitmonticone made their first contribution in #148

Full Changelog: 2.2...2.3.1

2.3.0

What's Changed

• enable syntax check in tox by default by @anilbey in #113
• Adds the ability to extract for absolute amplitude in addition to by @DrTaDa in #114
• Minor bug by @DrTaDa in #115
• Explicit the value used as a default for the standard deviation by @DrTaDa in #117
• Add default std values to current extraction by @DrTaDa in #118
• force numpy<1.24 until igor is updated by @AurelienJaquier in #119
• Fix 'keep alive' workflow and tox4 fix by @AurelienJaquier in #116
• Attempt at fixing auto-threshold by @DrTaDa in #120
• Improve the ticks markign the spikes in the plotting of the recordings by @DrTaDa in #121
• Add python 3.11 tests to github workflow by @AurelienJaquier in #123
• Add step detection to sAHP by @DrTaDa in #124
• Add stimulus representation in ecode docstrings by @AurelienJaquier in #125
• Fix sahp step detection by @DrTaDa in #126
• Display the auto-threshold when plotting a recording by @DrTaDa in #127
• Use maintained igor2 instead of unmaintained igor by @AurelienJaquier in #128
• Fix step detection by @AurelienJaquier in #129
• Recording: extract set_autothreshold as a method by @anilbey in #131
• Fix annyoing numpy warning by @arnaudon in #134
• Update README.md: fix broken link to ipynb by @anilbey in #135
• add parallel plotting by @arnaudon in #132
• Also pickles the targets/protocols by @DrTaDa in #137
• Fix smoothing for current amplitude detection by @arnaudon in #139
• adding spontaneous in ecode init by @darshanmandge in #141
• Add multi_stim_start and multi_stim_end to the efel_settings when by @DrTaDa in #142
• Use record auto_threshold when it is actually used by @DrTaDa in #145
• remove spaced from units in igor_reader by @DrTaDa in #146
• Refactor nwb reader by @DrTaDa in #143
• Fixed error bar plot and add holding current to the recording plots by @DrTaDa in #147
• Fix typos in example notebooks by @pitmonticone in #148
• update branch of gh-action-pypi-publish action by @AurelienJaquier in #150
• Turn readme from .md into .rst by @AurelienJaquier in #151
• use sphinx theme and README in documentation by @AurelienJaquier in #152
• add readthedocs.yml file by @AurelienJaquier in #153
• fix conf.py path in .readthedocs.yml by @AurelienJaquier in #154
• Make readthedocs install bluepyefe by @AurelienJaquier in #155
• Readthedocs install by @AurelienJaquier in #156
• add gh workflow to sync to ebrains mirror at each push by @AurelienJaquier in #157

New Contributors

• @arnaudon made their first contribution in #134
• @darshanmandge made their first contribution in #141
• @pitmonticone made their first contribution in #148

Full Changelog: 2.2...2.3.0