From c333a7b73c7aca72809c95a7529c00c65452c2b5 Mon Sep 17 00:00:00 2001 From: Mojtaba Barzegari <40744245+mbarzegary@users.noreply.github.com> Date: Mon, 25 Nov 2024 11:31:37 +0100 Subject: [PATCH] Fix typos in JOSS paper --- paper.md | 14 +++++++------- 1 file changed, 7 insertions(+), 7 deletions(-) diff --git a/paper.md b/paper.md index 1b7bab8..05fde3f 100644 --- a/paper.md +++ b/paper.md @@ -41,15 +41,15 @@ authors: corresponding: true affiliation: 3 affiliations: - - name: Materials Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA 94720 + - name: Materials Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, United States of America 94720 index: 1 - - name: Department of Physics, University of Michigan - Ann Arbor, Ann Arbor, MI, USA 48109 + - name: Department of Physics, University of Michigan - Ann Arbor, Ann Arbor, MI, United States of America 48109 index: 2 - - name: Energy Storage and Distributed Resources, Lawrence Berkeley National Laboratory, Berkeley, CA USA 94720 + - name: Energy Storage and Distributed Resources, Lawrence Berkeley National Laboratory, Berkeley, CA United States of America 94720 index: 3 - - name: Department of Materials Science and Engineering, University of California - Berkeley, CA, USA 94720 + - name: Department of Materials Science and Engineering, University of California - Berkeley, CA, United States of America 94720 index: 4 - - name: Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, CA, USA 94720 + - name: Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, CA, United States of America 94720 index: 5 date: 14 August 2024 bibliography: paper.bib @@ -72,7 +72,7 @@ We have designed `RNMC` to be easily extensible, enabling users to add additiona # Statement of need -Three are many existing kMC implementations, including several open source examples (e.g. the Stochastic Parallel PARticle Kinetic Simulator or `SPPARKS` [@garcia2009crossing] and `kmos` [@hoffmann2014kmos]). +There are many existing kMC implementations, including several open source examples (e.g. the Stochastic Parallel PARticle Kinetic Simulator or `SPPARKS` [@garcia2009crossing] and `kmos` [@hoffmann2014kmos]). `RNMC` began as a fork of SPPARKS but differs in several important ways. First, because `RNMC` uses the widely supported SQLite database engine for simulation inputs and outputs, it facilitates the automation of simulations. Second, `RNMC` has a focus on modularity. @@ -85,7 +85,7 @@ The simulation modules already implemented in `RNMC` provide unique capabilities `NPMC` can be used to simulate energy transfer interactions between dopants in nanoparticles, their radiative transitions, and nonlinear processes such as upconversion [@chan2015combinatorial] and photon avalanching [@skripka2023NL]. `LGMC` is also somewhat unique in that it can simulate multi-phase systems and electrochemical processes. Simulations using `LGMC` can include a lattice region and a homogeneous solution region which can interact *via* interfacial reactions. -Electrochemcial reactions can be treated using Marcus theory [@marcus1965theory] or Butler-Volmer kinetics [@newman2021electrochemical]. +Electrochemical reactions can be treated using Marcus theory [@marcus1965theory] or Butler-Volmer kinetics [@newman2021electrochemical]. Because it allows for a dynamic lattice region, `LGMC` is also appropriate for simulations of nucleation and growth, dissolution, precipitation, and related phenomena. We have already used the `GMC` module in a number of prior works in applications related to Li-ion and Mg-ion batteries [@spotte2022toward; @barter2023predictive; @spotte2023chemical]. We note that these simulations included tens of millions of reactions, demonstrating that `RNMC` is able to scale to large and complex reaction networks. In addition, we have used `NPMC` to perform Bayesian optimization of upconverting nanoparticles [@xia2023accelerating].