coverage should not contain the tests

[orbeckst]

PR #39 adds testing with Gromacs 4 and Gromacs 5 (yay!). However, coverage also analyses coverage of the tests themselves. That's not helpful. All tests ought to be excluded from coverage reporting.

There should be some simple settings for coverage in the travis.yml file that exclude tests.

[orbeckst]

I was not able to find anything in the rather sparse docs for pytest-cov (which we are using) or the related coverage docs.

@dotsdl any ideas?

For example output see, for instance, https://travis-ci.org/Becksteinlab/MDPOW/jobs/150184380.

[orbeckst]

@ianmkenney can you please find out how to fix coverage so that they do not contain the tests?

[ianmkenney]

Sure thing

On Aug 13, 2016, at 3:14 PM, Oliver Beckstein [email protected] wrote:

@ianmkenney can you please find out how to fix coverage so that they do not contain the tests?

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[dotsdl]

See how we do this for datreant.core: https://github.com/datreant/datreant.core/blob/develop/.coveragerc

[ianmkenney]

For future reference: http://coverage.readthedocs.io/en/coverage-4.1/config.html

[ianmkenney]

@orbeckst I have a new PR for codecov. My addition of .coveragerc (thanks @dotsdl ) fixed the problem. Some of the options listed in the docs might be interesting to add though, so I will leave it open for another few days while I look at our options.