From abc86f89453a82504fb616aa81a41ff796014221 Mon Sep 17 00:00:00 2001
From: Andreas Poehlmann <andreas@poehlmann.io>
Date: Fri, 31 Jul 2020 15:06:04 +0200
Subject: [PATCH] paquo: more pep517 compliant config

Reference #24
---
 MANIFEST.in      |  4 ++++
 environment.yaml |  2 +-
 pyproject.toml   | 18 +++++++++++++++++-
 pytest.ini       |  5 -----
 setup.cfg        |  8 +-------
 5 files changed, 23 insertions(+), 14 deletions(-)
 create mode 100644 MANIFEST.in
 delete mode 100644 pytest.ini

diff --git a/MANIFEST.in b/MANIFEST.in
new file mode 100644
index 0000000..6f77c3f
--- /dev/null
+++ b/MANIFEST.in
@@ -0,0 +1,4 @@
+prune .github
+exclude .git*
+exclude .*.yml
+recursive-exclude . *secrets*
diff --git a/environment.yaml b/environment.yaml
index 70e7ac9..2d1ba33 100644
--- a/environment.yaml
+++ b/environment.yaml
@@ -12,7 +12,7 @@ dependencies:
   - jpype1>=1.0.1
   - shapely
   - qupath
-  - pytest
+  - pytest>=6
   - pytest-cov
   - pip:
     - "-e ."
diff --git a/pyproject.toml b/pyproject.toml
index 902b573..9198fb5 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -2,10 +2,26 @@
 requires = [
   "setuptools >= 42",
   "wheel",
-  "setuptools_scm[toml]>=3.4"
+  "setuptools_scm[toml]>=3.4",
 ]
 build-backend = "setuptools.build_meta"
 
+
 [tool.setuptools_scm]
 write_to = "paquo/_version.py"
 version_scheme = "post-release"
+
+
+[tool.pytest.ini_options]
+addopts = [
+  "-v",
+  # (only needed by windows) disable faulthandler plugin to suppress non-fatal error msgs
+  "-p", "no:faulthandler",
+]
+
+
+[tool.coverage.report]
+exclude_lines = [
+  "pragma: no cover",
+  "raise NotImplementedError",
+]
diff --git a/pytest.ini b/pytest.ini
deleted file mode 100644
index d1bba72..0000000
--- a/pytest.ini
+++ /dev/null
@@ -1,5 +0,0 @@
-[pytest]
-addopts =
-    -v
-    # (only needed by windows) disable faulthandler plugin to suppress non-fatal error msgs
-    -p no:faulthandler
diff --git a/setup.cfg b/setup.cfg
index 184ac4a..5a817b9 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -32,21 +32,15 @@ classifiers =
 zip_safe = False
 packages = find:
 python_requires = >=3.8
-include_package_data = True
 install_requires =
     JPype1>=1.0.1
     shapely
 
 [options.extras_require]
 dev =
-    pytest
+    pytest>=6
     pytest-cov
 
 docs =
     sphinx
     sphinxemoji
-
-[coverage:report]
-exclude_lines =
-    pragma: no cover
-    raise NotImplementedError