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Absent link to intron indexes #5

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mariafiruleva opened this issue Dec 16, 2019 · 2 comments
Open

Absent link to intron indexes #5

mariafiruleva opened this issue Dec 16, 2019 · 2 comments

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@mariafiruleva
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Dear BUStools team,

Could you please provide links to intron indexes for both mouse and human?

In your tutorial, there are no links to corresponding files.

Best wishes,
Maria

@RBBurl1227
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RBBurl1227 commented Jan 9, 2020

I would also like the links to the intron indices posted. Specifically for mouse. In the nuclei tutorial, you have the following,

"To save you time, we have made the mouse cDNA and intron index built with the mouse ensembl 86 release. You can download the index and other files used in this tutorial at Caltech Data (19GB zip file) here:

==== insert caltech data link to mouse intron index ====

26GB cDNA_introns.idx
46MB cDNA_introns.t2g.txt
3.7MB cDNA_transcripts_to_capture.txt
20MB introns_transcripts_to_capture.txt"

Looks like you might have forgotten to insert the link. Thanks.

@miretchin
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Would be great if you could add the mouse velocity index, BUStools team! 🙏

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