From 013a0a3badf60945e1bb2da26e7f3e5000abdf32 Mon Sep 17 00:00:00 2001 From: Leonid Kostrykin <void@evoid.de> Date: Tue, 27 Feb 2024 16:40:20 +0100 Subject: [PATCH] Remove skip `tool_xsd` --- .github/workflows/pr.yaml | 3 --- tools/superdsm/.shed.yml | 2 +- 2 files changed, 1 insertion(+), 4 deletions(-) diff --git a/.github/workflows/pr.yaml b/.github/workflows/pr.yaml index 67827dee..23565aea 100644 --- a/.github/workflows/pr.yaml +++ b/.github/workflows/pr.yaml @@ -17,7 +17,6 @@ on: - '*' env: GALAXY_FORK: galaxyproject - # TODO remove additional-planemo-options from lint once biii is allowed in xsd GALAXY_BRANCH: release_23.1 MAX_CHUNKS: 4 MAX_FILE_SIZE: 1M @@ -130,12 +129,10 @@ jobs: if: ${{ github.event_name == 'pull_request' }} run: | echo "FAIL_LEVEL=warn" >> "$GITHUB_ENV" - echo "SKIP=-s tool_xsd" >> "$GITHUB_ENV" - name: Set fail level for merge if: ${{ github.event_name != 'pull_request' }} run: | echo "FAIL_LEVEL=error" >> "$GITHUB_ENV" - echo "SKIP=-s tool_xsd" >> "$GITHUB_ENV" - name: Planemo lint uses: galaxyproject/planemo-ci-action@v1 id: lint diff --git a/tools/superdsm/.shed.yml b/tools/superdsm/.shed.yml index 6a77949d..2b7005cb 100644 --- a/tools/superdsm/.shed.yml +++ b/tools/superdsm/.shed.yml @@ -2,7 +2,7 @@ categories: - Imaging description: Globally optimal segmentation method based on superadditivity and deformable shape models for cell nuclei in fluorescence microscopy images long_description: Globally optimal segmentation method based on superadditivity and deformable shape models for cell nuclei in 2-D fluorescence microscopy images. -name: superdsm +name: superdsm owner: imgteam homepage_url: https://github.com/bmcv remote_repository_url: https://github.com/BMCV/galaxy-image-analysis/tree/master/tools/superdsm/