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Data-describing-Biobank.md

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Data describing Biobank entity

Definition

For MIABIS Core 3.0 purposes, Biobank is defined as a legal entity or part of a legal entity that performs biobanking, making the description aligned with ISO 20387:2018. In MIABIS biobank is an entity that stores samples and data related to the samples. In MIABIS Core 3.0 biobanks do not contain samples and data directly, as they are hosting sample collections to which the samples and data are embedded in. On the level of biobanks, only attributes related to the organizational aspect of the biobanks are represented.

The Biobank has stayed almost the same since MIABIS v1, here in Core v3 by Eklund et al. 2024 some new attributes highlighting the biobank services and quality are introduced.

Attribute list

Attribute Code Attribute Name Allowed Data Types Description Constraints Allowed Values
MIABIS-BIOBANK-01 ID Text ID of the biobank. The ID is technical and given by the implementation. Implementation will provide instructions on how to form the ID.
MIABIS-BIOBANK-02 Acronym Text Short name in use for the biobank. If applicable.
MIABIS-BIOBANK-03 Name Text Name of the biobank (preferably in English).
MIABIS-BIOBANK-04 URL Text Complete http-address for the biobank.
MIABIS-BIOBANK-05 Juristic Person Text Juristic person i.e. a university, concern, county council etc. for the biobank.
MIABIS-BIOBANK-06 Country Text Two letter code for the country of the biobank. ISO-standard 3166 alpha2.
MIABIS-BIOBANK-07 Contact Information Structured data Contact information for the contact person/person responsible of the biobank (Structured attribute). MIABIS-BIOBANK-07
MIABIS-BIOBANK-08 Description Text Description of the biobank in English. Free text description of the biobank. Recommendation max. 2000 char.
MIABIS-BIOBANK-09 Infrastructural capabilities Enumerated values The technical infrastructural capabilities that the biobank can offer to the clients. Sample storage, Data storage, Biosafety abilities.
MIABIS-BIOBANK-10 Organisational capabilities Enumerated values The organisational capabilities and services that the biobank can provide to support clients. Recontact with donors, Facilitating clinical trials, Setting up prospective collections, Access to omics data, Access to laboratory analysis data, Access to donors'clinical data, Access to pathology archive, Access to radiology archive, Access to national medical registries, Other
MIABIS-BIOBANK-11 Bioprocessing and analytical capabilities Enumerated values Bioprocessing and analytical services that the biobank can offer to the clients. Biochemical analyses, Genomics, Nucleic acid extraction, Proteomics, Metabolomics, Histology, Cell-lines processing, Virology, Sample processing, Sample shipping, Sample quality control services, Other
MIABIS-BIOBANK-12 Quality Management standard Enumerated values The standards that the biobank is certified or accredited for. Attribute value list can be expanded by the implementation, and implementation needs to verify provided data. ISO 20387, ISO 9001, Other