diff --git a/environment.yml b/environment.yml index 68d9084..0ea1d27 100644 --- a/environment.yml +++ b/environment.yml @@ -34,4 +34,5 @@ dependencies: - podpac - boto3 - webob + - pygsheets - -r doc-requirements.txt diff --git a/notebooks/paper/initial-data-exploration.ipynb b/notebooks/paper/initial-data-exploration.ipynb new file mode 100644 index 0000000..c952ae1 --- /dev/null +++ b/notebooks/paper/initial-data-exploration.ipynb @@ -0,0 +1,2130 @@ +{ + "cells": [ + { + "cell_type": "markdown", + "id": "9592e460-1443-4f51-b1ba-90a6ed4a8328", + "metadata": {}, + "source": [ + "# Analyze the Pluvio Data - Entire Season + Case Selection" + ] + }, + { + "cell_type": "markdown", + "id": "bfc638bb-faa2-4d36-8a4f-d26f88f58ef8", + "metadata": {}, + "source": [ + "## Imports" + ] + }, + { + "cell_type": "code", + "execution_count": 23, + "id": "a38422ce-2b88-4395-b8ea-fc92fa56c8fa", + "metadata": {}, + "outputs": [ + { + "data": { + "application/javascript": [ + "(function(root) {\n", + " function now() {\n", + " return new Date();\n", + " }\n", + "\n", + " var force = true;\n", + " var py_version = '3.3.4'.replace('rc', '-rc.').replace('.dev', '-dev.');\n", + " var reloading = false;\n", + " var Bokeh = root.Bokeh;\n", + "\n", + " if (typeof (root._bokeh_timeout) === \"undefined\" || force) {\n", + " root._bokeh_timeout = Date.now() + 5000;\n", + " root._bokeh_failed_load = false;\n", + " }\n", + "\n", + " function run_callbacks() {\n", + " try {\n", + " root._bokeh_onload_callbacks.forEach(function(callback) {\n", + " if (callback != null)\n", + " callback();\n", + " });\n", + " } finally {\n", + " delete root._bokeh_onload_callbacks;\n", + " }\n", + " console.debug(\"Bokeh: all callbacks have finished\");\n", + " }\n", + "\n", + " function load_libs(css_urls, js_urls, js_modules, js_exports, callback) {\n", + " if (css_urls == null) css_urls = [];\n", + " if (js_urls == null) js_urls = [];\n", + " if (js_modules == null) js_modules = [];\n", + " if (js_exports == null) js_exports = {};\n", + "\n", + " root._bokeh_onload_callbacks.push(callback);\n", + "\n", + " if (root._bokeh_is_loading > 0) {\n", + " console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n", + " return null;\n", + " }\n", + " if (js_urls.length === 0 && js_modules.length === 0 && Object.keys(js_exports).length === 0) {\n", + " run_callbacks();\n", + " return null;\n", + " }\n", + " if (!reloading) {\n", + " console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n", + " }\n", + "\n", + " function on_load() {\n", + " root._bokeh_is_loading--;\n", + " if (root._bokeh_is_loading === 0) {\n", + " console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n", + " run_callbacks()\n", + " }\n", + " }\n", + " window._bokeh_on_load = on_load\n", + "\n", + " function on_error() {\n", + " console.error(\"failed to load \" + url);\n", + " }\n", + "\n", + " var skip = [];\n", + " if (window.requirejs) {\n", + " window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 'https://cdn.jsdelivr.net/npm/gridstack@7.2.3/dist/gridstack-all', 'notyf': 'https://cdn.jsdelivr.net/npm/notyf@3/notyf.min'}, 'shim': {'jspanel': {'exports': 'jsPanel'}, 'gridstack': {'exports': 'GridStack'}}});\n", + " require([\"jspanel\"], function(jsPanel) {\n", + "\twindow.jsPanel = jsPanel\n", + "\ton_load()\n", + " })\n", + " require([\"jspanel-modal\"], function() {\n", + "\ton_load()\n", + " })\n", + " require([\"jspanel-tooltip\"], function() {\n", + "\ton_load()\n", + " })\n", + " require([\"jspanel-hint\"], function() {\n", + "\ton_load()\n", + " })\n", + " require([\"jspanel-layout\"], function() {\n", + "\ton_load()\n", + " })\n", + " require([\"jspanel-contextmenu\"], function() {\n", + "\ton_load()\n", + " })\n", + " require([\"jspanel-dock\"], function() {\n", + "\ton_load()\n", + " })\n", + " require([\"gridstack\"], function(GridStack) {\n", + "\twindow.GridStack = GridStack\n", + "\ton_load()\n", + " })\n", + " require([\"notyf\"], function() {\n", + "\ton_load()\n", + " })\n", + " root._bokeh_is_loading = css_urls.length + 9;\n", + " } else {\n", + " root._bokeh_is_loading = css_urls.length + js_urls.length + js_modules.length + Object.keys(js_exports).length;\n", + " }\n", + "\n", + " var existing_stylesheets = []\n", + " var links = document.getElementsByTagName('link')\n", + " for (var i = 0; i < links.length; i++) {\n", + " var link = links[i]\n", + " if (link.href != null) {\n", + "\texisting_stylesheets.push(link.href)\n", + " }\n", + " }\n", + " for (var i = 0; i < css_urls.length; i++) {\n", + " var url = css_urls[i];\n", + " if (existing_stylesheets.indexOf(url) !== -1) {\n", + "\ton_load()\n", + "\tcontinue;\n", + " }\n", + " const element = document.createElement(\"link\");\n", + " element.onload = on_load;\n", + " element.onerror = on_error;\n", + " element.rel = \"stylesheet\";\n", + " element.type = \"text/css\";\n", + " element.href = url;\n", + " console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n", + " document.body.appendChild(element);\n", + " } if (((window['jsPanel'] !== undefined) && (!(window['jsPanel'] instanceof HTMLElement))) || window.requirejs) {\n", + " var urls = 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HTMLElement))) || window.requirejs) {\n", + " var urls = ['https://cdn.holoviz.org/panel/1.3.8/dist/bundled/gridstack/gridstack@7.2.3/dist/gridstack-all.js'];\n", + " for (var i = 0; i < urls.length; i++) {\n", + " skip.push(urls[i])\n", + " }\n", + " } if (((window['Notyf'] !== undefined) && (!(window['Notyf'] instanceof HTMLElement))) || window.requirejs) {\n", + " var urls = ['https://cdn.holoviz.org/panel/1.3.8/dist/bundled/notificationarea/notyf@3/notyf.min.js'];\n", + " for (var i = 0; i < urls.length; i++) {\n", + " skip.push(urls[i])\n", + " }\n", + " } var existing_scripts = []\n", + " var scripts = document.getElementsByTagName('script')\n", + " for (var i = 0; i < scripts.length; i++) {\n", + " var script = scripts[i]\n", + " if (script.src != null) {\n", + "\texisting_scripts.push(script.src)\n", + " }\n", + " }\n", + " for (var i = 0; i < js_urls.length; i++) {\n", + " var url = js_urls[i];\n", + " if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n", + "\tif (!window.requirejs) {\n", + "\t on_load();\n", + "\t}\n", + "\tcontinue;\n", + " }\n", + " var element = document.createElement('script');\n", + " element.onload = on_load;\n", + " element.onerror = on_error;\n", + " element.async = false;\n", + " element.src = url;\n", + " console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n", + " document.head.appendChild(element);\n", + " }\n", + " for (var i = 0; i < js_modules.length; i++) {\n", + " var url = js_modules[i];\n", + " if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n", + "\tif (!window.requirejs) {\n", + "\t on_load();\n", + "\t}\n", + "\tcontinue;\n", + " }\n", + " var element = document.createElement('script');\n", + " element.onload = on_load;\n", + " element.onerror = on_error;\n", + " element.async = false;\n", + " element.src = url;\n", + " element.type = \"module\";\n", + " console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n", + " document.head.appendChild(element);\n", + " }\n", + " for (const name in js_exports) {\n", + " var url = js_exports[name];\n", + " if (skip.indexOf(url) >= 0 || root[name] != null) {\n", + "\tif (!window.requirejs) {\n", + "\t on_load();\n", + "\t}\n", + "\tcontinue;\n", + " }\n", + " var element = document.createElement('script');\n", + " element.onerror = on_error;\n", + " element.async = false;\n", + " element.type = \"module\";\n", + " console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n", + " element.textContent = `\n", + " import ${name} from \"${url}\"\n", + " window.${name} = ${name}\n", + " window._bokeh_on_load()\n", + " `\n", + " document.head.appendChild(element);\n", + " }\n", + " if (!js_urls.length && !js_modules.length) {\n", + " on_load()\n", + " }\n", + " };\n", + "\n", + " function inject_raw_css(css) {\n", + " const element = document.createElement(\"style\");\n", + " element.appendChild(document.createTextNode(css));\n", + " document.body.appendChild(element);\n", + " }\n", + "\n", + " var js_urls = [\"https://cdn.bokeh.org/bokeh/release/bokeh-3.3.4.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-gl-3.3.4.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-widgets-3.3.4.min.js\", \"https://cdn.bokeh.org/bokeh/release/bokeh-tables-3.3.4.min.js\", \"https://cdn.holoviz.org/panel/1.3.8/dist/panel.min.js\"];\n", + " var js_modules = [];\n", + " var js_exports = {};\n", + " var css_urls = [];\n", + " var inline_js = [ function(Bokeh) {\n", + " Bokeh.set_log_level(\"info\");\n", + " },\n", + "function(Bokeh) {} // ensure no trailing comma for IE\n", + " ];\n", + "\n", + " function run_inline_js() {\n", + " if ((root.Bokeh !== undefined) || (force === true)) {\n", + " for (var i = 0; i < inline_js.length; i++) {\n", + "\ttry {\n", + " inline_js[i].call(root, root.Bokeh);\n", + "\t} catch(e) {\n", + "\t if (!reloading) {\n", + "\t throw e;\n", + "\t }\n", + "\t}\n", + " }\n", + " // Cache old bokeh versions\n", + " if (Bokeh != undefined && !reloading) {\n", + "\tvar NewBokeh = root.Bokeh;\n", + "\tif (Bokeh.versions === undefined) {\n", + "\t Bokeh.versions = new Map();\n", + "\t}\n", + "\tif (NewBokeh.version !== Bokeh.version) {\n", + "\t Bokeh.versions.set(NewBokeh.version, NewBokeh)\n", + "\t}\n", + "\troot.Bokeh = Bokeh;\n", + " }} else if (Date.now() < root._bokeh_timeout) {\n", + " setTimeout(run_inline_js, 100);\n", + " } else if (!root._bokeh_failed_load) {\n", + " console.log(\"Bokeh: BokehJS failed to load within specified timeout.\");\n", + " root._bokeh_failed_load = true;\n", + " }\n", + " root._bokeh_is_initializing = false\n", + " }\n", + "\n", + " function load_or_wait() {\n", + " // Implement a backoff loop that tries to ensure we do not load multiple\n", + " // versions of Bokeh and its dependencies at the same time.\n", + " // In recent versions we use the root._bokeh_is_initializing flag\n", + " // to determine whether there is an ongoing attempt to initialize\n", + " // bokeh, however for backward compatibility we also try to ensure\n", + " // that we do not start loading a newer (Panel>=1.0 and Bokeh>3) version\n", + " // before older versions are fully initialized.\n", + " if (root._bokeh_is_initializing && Date.now() > root._bokeh_timeout) {\n", + " root._bokeh_is_initializing = false;\n", + " root._bokeh_onload_callbacks = undefined;\n", + " console.log(\"Bokeh: BokehJS was loaded multiple times but one version failed to initialize.\");\n", + " load_or_wait();\n", + " } else if (root._bokeh_is_initializing || (typeof root._bokeh_is_initializing === \"undefined\" && root._bokeh_onload_callbacks !== undefined)) {\n", + " setTimeout(load_or_wait, 100);\n", + " } else {\n", + " root._bokeh_is_initializing = true\n", + " root._bokeh_onload_callbacks = []\n", + " var bokeh_loaded = Bokeh != null && (Bokeh.version === py_version || (Bokeh.versions !== undefined && Bokeh.versions.has(py_version)));\n", + " if (!reloading && !bokeh_loaded) {\n", + "\troot.Bokeh = undefined;\n", + " }\n", + " load_libs(css_urls, js_urls, js_modules, js_exports, function() {\n", + "\tconsole.debug(\"Bokeh: BokehJS plotting callback run at\", now());\n", + "\trun_inline_js();\n", + " });\n", + " }\n", + " }\n", + " // Give older versions of the autoload script a head-start to ensure\n", + " // they initialize before we start loading newer version.\n", + " setTimeout(load_or_wait, 100)\n", + "}(window));" + ], + "application/vnd.holoviews_load.v0+json": "(function(root) {\n function now() {\n return new Date();\n }\n\n var force = true;\n var py_version = '3.3.4'.replace('rc', '-rc.').replace('.dev', '-dev.');\n var reloading = false;\n var Bokeh = root.Bokeh;\n\n if (typeof (root._bokeh_timeout) === \"undefined\" || force) {\n root._bokeh_timeout = Date.now() + 5000;\n root._bokeh_failed_load = false;\n }\n\n function run_callbacks() {\n try {\n root._bokeh_onload_callbacks.forEach(function(callback) {\n if (callback != null)\n callback();\n });\n } finally {\n delete root._bokeh_onload_callbacks;\n }\n console.debug(\"Bokeh: all callbacks have finished\");\n }\n\n function load_libs(css_urls, js_urls, js_modules, js_exports, callback) {\n if (css_urls == null) css_urls = [];\n if (js_urls == null) js_urls = [];\n if (js_modules == null) js_modules = [];\n if (js_exports == null) js_exports = {};\n\n root._bokeh_onload_callbacks.push(callback);\n\n if (root._bokeh_is_loading > 0) {\n console.debug(\"Bokeh: BokehJS is being loaded, scheduling callback at\", now());\n return null;\n }\n if (js_urls.length === 0 && js_modules.length === 0 && Object.keys(js_exports).length === 0) {\n run_callbacks();\n return null;\n }\n if (!reloading) {\n console.debug(\"Bokeh: BokehJS not loaded, scheduling load and callback at\", now());\n }\n\n function on_load() {\n root._bokeh_is_loading--;\n if (root._bokeh_is_loading === 0) {\n console.debug(\"Bokeh: all BokehJS libraries/stylesheets loaded\");\n run_callbacks()\n }\n }\n window._bokeh_on_load = on_load\n\n function on_error() {\n console.error(\"failed to load \" + url);\n }\n\n var skip = [];\n if (window.requirejs) {\n window.requirejs.config({'packages': {}, 'paths': {'jspanel': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/jspanel', 'jspanel-modal': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal', 'jspanel-tooltip': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip', 'jspanel-hint': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint', 'jspanel-layout': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout', 'jspanel-contextmenu': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu', 'jspanel-dock': 'https://cdn.jsdelivr.net/npm/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock', 'gridstack': 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Object.keys(js_exports).length;\n }\n\n var existing_stylesheets = []\n var links = document.getElementsByTagName('link')\n for (var i = 0; i < links.length; i++) {\n var link = links[i]\n if (link.href != null) {\n\texisting_stylesheets.push(link.href)\n }\n }\n for (var i = 0; i < css_urls.length; i++) {\n var url = css_urls[i];\n if (existing_stylesheets.indexOf(url) !== -1) {\n\ton_load()\n\tcontinue;\n }\n const element = document.createElement(\"link\");\n element.onload = on_load;\n element.onerror = on_error;\n element.rel = \"stylesheet\";\n element.type = \"text/css\";\n element.href = url;\n console.debug(\"Bokeh: injecting link tag for BokehJS stylesheet: \", url);\n document.body.appendChild(element);\n } if (((window['jsPanel'] !== undefined) && (!(window['jsPanel'] instanceof HTMLElement))) || window.requirejs) {\n var urls = ['https://cdn.holoviz.org/panel/1.3.8/dist/bundled/floatpanel/jspanel4@4.12.0/dist/jspanel.js', 'https://cdn.holoviz.org/panel/1.3.8/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/modal/jspanel.modal.js', 'https://cdn.holoviz.org/panel/1.3.8/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/tooltip/jspanel.tooltip.js', 'https://cdn.holoviz.org/panel/1.3.8/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/hint/jspanel.hint.js', 'https://cdn.holoviz.org/panel/1.3.8/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/layout/jspanel.layout.js', 'https://cdn.holoviz.org/panel/1.3.8/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/contextmenu/jspanel.contextmenu.js', 'https://cdn.holoviz.org/panel/1.3.8/dist/bundled/floatpanel/jspanel4@4.12.0/dist/extensions/dock/jspanel.dock.js'];\n for (var i = 0; i < urls.length; i++) {\n skip.push(urls[i])\n }\n } if (((window['GridStack'] !== undefined) && (!(window['GridStack'] instanceof HTMLElement))) || window.requirejs) {\n var urls = 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element.async = false;\n element.src = url;\n console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n document.head.appendChild(element);\n }\n for (var i = 0; i < js_modules.length; i++) {\n var url = js_modules[i];\n if (skip.indexOf(url) !== -1 || existing_scripts.indexOf(url) !== -1) {\n\tif (!window.requirejs) {\n\t on_load();\n\t}\n\tcontinue;\n }\n var element = document.createElement('script');\n element.onload = on_load;\n element.onerror = on_error;\n element.async = false;\n element.src = url;\n element.type = \"module\";\n console.debug(\"Bokeh: injecting script tag for BokehJS library: \", url);\n document.head.appendChild(element);\n }\n for (const name in js_exports) {\n var url = js_exports[name];\n if (skip.indexOf(url) >= 0 || root[name] != null) {\n\tif (!window.requirejs) {\n\t on_load();\n\t}\n\tcontinue;\n }\n var element = document.createElement('script');\n element.onerror = on_error;\n element.async = false;\n element.type = \"module\";\n 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(Jupyter.notebook.kernel != null))) {\n", + " var comm_manager = window.comm_manager || Jupyter.notebook.kernel.comm_manager;\n", + " comm_manager.register_target(comm_id, function(comm) {\n", + " comm.on_msg(msg_handler);\n", + " });\n", + " } else if ((plot_id in window.PyViz.kernels) && (window.PyViz.kernels[plot_id])) {\n", + " window.PyViz.kernels[plot_id].registerCommTarget(comm_id, function(comm) {\n", + " comm.onMsg = msg_handler;\n", + " });\n", + " } else if (typeof google != 'undefined' && google.colab.kernel != null) {\n", + " google.colab.kernel.comms.registerTarget(comm_id, (comm) => {\n", + " var messages = comm.messages[Symbol.asyncIterator]();\n", + " function processIteratorResult(result) {\n", + " var message = result.value;\n", + " console.log(message)\n", + " var content = {data: message.data, comm_id};\n", + " var buffers = []\n", + " for (var buffer of message.buffers || []) {\n", + " buffers.push(new DataView(buffer))\n", + " }\n", + " var metadata = 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" return\n", + " }\n", + " var id = output.metadata[EXEC_MIME_TYPE][\"id\"];\n", + " var toinsert = output_area.element.find(\".\" + CLASS_NAME.split(' ')[0]);\n", + " if (id !== undefined) {\n", + " var nchildren = toinsert.length;\n", + " var html_node = toinsert[nchildren-1].children[0];\n", + " html_node.innerHTML = output.data[HTML_MIME_TYPE];\n", + " var scripts = [];\n", + " var nodelist = html_node.querySelectorAll(\"script\");\n", + " for (var i in nodelist) {\n", + " if (nodelist.hasOwnProperty(i)) {\n", + " scripts.push(nodelist[i])\n", + " }\n", + " }\n", + "\n", + " scripts.forEach( function (oldScript) {\n", + " var newScript = document.createElement(\"script\");\n", + " var attrs = [];\n", + " var nodemap = oldScript.attributes;\n", + " for (var j in nodemap) {\n", + " if (nodemap.hasOwnProperty(j)) {\n", + " attrs.push(nodemap[j])\n", + " }\n", + " }\n", + " attrs.forEach(function(attr) { newScript.setAttribute(attr.name, attr.value) });\n", + " newScript.appendChild(document.createTextNode(oldScript.innerHTML));\n", + " oldScript.parentNode.replaceChild(newScript, oldScript);\n", + " });\n", + " if (JS_MIME_TYPE in output.data) {\n", + " toinsert[nchildren-1].children[1].textContent = output.data[JS_MIME_TYPE];\n", + " }\n", + " output_area._hv_plot_id = id;\n", + " if ((window.Bokeh !== undefined) && (id in Bokeh.index)) {\n", + " window.PyViz.plot_index[id] = Bokeh.index[id];\n", + " } else {\n", + " window.PyViz.plot_index[id] = null;\n", + " }\n", + " } else if (output.metadata[EXEC_MIME_TYPE][\"server_id\"] !== undefined) {\n", + " var bk_div = document.createElement(\"div\");\n", + " bk_div.innerHTML = output.data[HTML_MIME_TYPE];\n", + " var script_attrs = bk_div.children[0].attributes;\n", + " for (var i = 0; i < script_attrs.length; i++) {\n", + " toinsert[toinsert.length - 1].childNodes[1].setAttribute(script_attrs[i].name, script_attrs[i].value);\n", + " }\n", + " // store reference to server id on output_area\n", + " output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n", + " }\n", + "}\n", + "\n", + "/**\n", + " * Handle when an output is cleared or removed\n", + " */\n", + "function handle_clear_output(event, handle) {\n", + " var id = handle.cell.output_area._hv_plot_id;\n", + " var server_id = handle.cell.output_area._bokeh_server_id;\n", + " if (((id === undefined) || !(id in PyViz.plot_index)) && (server_id !== undefined)) { return; }\n", + " var comm = window.PyViz.comm_manager.get_client_comm(\"hv-extension-comm\", \"hv-extension-comm\", function () {});\n", + " if (server_id !== null) {\n", + " comm.send({event_type: 'server_delete', 'id': server_id});\n", + " return;\n", + " } else if (comm !== null) {\n", + " comm.send({event_type: 'delete', 'id': id});\n", + " }\n", + " delete PyViz.plot_index[id];\n", + " if ((window.Bokeh !== undefined) & (id in window.Bokeh.index)) {\n", + " var doc = window.Bokeh.index[id].model.document\n", + " doc.clear();\n", + " const i = window.Bokeh.documents.indexOf(doc);\n", + " if (i > -1) {\n", + " window.Bokeh.documents.splice(i, 1);\n", + " }\n", + " }\n", + "}\n", + "\n", + "/**\n", + " * Handle kernel restart event\n", + " */\n", + "function handle_kernel_cleanup(event, handle) {\n", + " delete PyViz.comms[\"hv-extension-comm\"];\n", + " window.PyViz.plot_index = {}\n", + "}\n", + "\n", + "/**\n", + " * Handle update_display_data messages\n", + " */\n", + "function handle_update_output(event, handle) {\n", + " handle_clear_output(event, {cell: {output_area: handle.output_area}})\n", + " handle_add_output(event, handle)\n", + "}\n", + "\n", + "function register_renderer(events, OutputArea) {\n", + " function append_mime(data, metadata, element) {\n", + " // create a DOM node to render to\n", + " var toinsert = this.create_output_subarea(\n", + " metadata,\n", + " CLASS_NAME,\n", + " EXEC_MIME_TYPE\n", + " );\n", + " this.keyboard_manager.register_events(toinsert);\n", + " // Render to node\n", + " var props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n", + " render(props, toinsert[0]);\n", + " element.append(toinsert);\n", + " return toinsert\n", + " }\n", + "\n", + " events.on('output_added.OutputArea', handle_add_output);\n", + " events.on('output_updated.OutputArea', handle_update_output);\n", + " events.on('clear_output.CodeCell', handle_clear_output);\n", + " events.on('delete.Cell', handle_clear_output);\n", + " events.on('kernel_ready.Kernel', handle_kernel_cleanup);\n", + "\n", + " OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n", + " safe: true,\n", + " index: 0\n", + " });\n", + "}\n", + "\n", + "if (window.Jupyter !== undefined) {\n", + " try {\n", + " var events = require('base/js/events');\n", + " var OutputArea = require('notebook/js/outputarea').OutputArea;\n", + " if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n", + " register_renderer(events, OutputArea);\n", + " }\n", + " } catch(err) {\n", + " }\n", + "}\n" + ], + "application/vnd.holoviews_load.v0+json": "\nif ((window.PyViz === undefined) || (window.PyViz instanceof HTMLElement)) {\n window.PyViz = {comms: {}, comm_status:{}, kernels:{}, receivers: {}, plot_index: []}\n}\n\n\n function JupyterCommManager() {\n }\n\n JupyterCommManager.prototype.register_target = function(plot_id, comm_id, msg_handler) {\n if (window.comm_manager || ((window.Jupyter !== undefined) && (Jupyter.notebook.kernel != null))) {\n var comm_manager = window.comm_manager || Jupyter.notebook.kernel.comm_manager;\n comm_manager.register_target(comm_id, function(comm) {\n comm.on_msg(msg_handler);\n });\n } else if ((plot_id in window.PyViz.kernels) && (window.PyViz.kernels[plot_id])) {\n window.PyViz.kernels[plot_id].registerCommTarget(comm_id, function(comm) {\n comm.onMsg = msg_handler;\n });\n } else if (typeof google != 'undefined' && google.colab.kernel != null) {\n google.colab.kernel.comms.registerTarget(comm_id, (comm) => {\n var messages = comm.messages[Symbol.asyncIterator]();\n function processIteratorResult(result) {\n var message = result.value;\n console.log(message)\n var content = {data: message.data, comm_id};\n var buffers = []\n for (var buffer of message.buffers || []) {\n buffers.push(new DataView(buffer))\n }\n var metadata = message.metadata || {};\n var msg = {content, buffers, metadata}\n msg_handler(msg);\n return messages.next().then(processIteratorResult);\n }\n return messages.next().then(processIteratorResult);\n })\n }\n }\n\n JupyterCommManager.prototype.get_client_comm = function(plot_id, comm_id, msg_handler) {\n if (comm_id in window.PyViz.comms) {\n return window.PyViz.comms[comm_id];\n } else if (window.comm_manager || ((window.Jupyter !== undefined) && (Jupyter.notebook.kernel != null))) {\n var comm_manager = window.comm_manager || Jupyter.notebook.kernel.comm_manager;\n var comm = comm_manager.new_comm(comm_id, {}, {}, {}, comm_id);\n if (msg_handler) {\n comm.on_msg(msg_handler);\n }\n } else if ((plot_id in window.PyViz.kernels) && (window.PyViz.kernels[plot_id])) {\n var comm = window.PyViz.kernels[plot_id].connectToComm(comm_id);\n comm.open();\n if (msg_handler) {\n comm.onMsg = msg_handler;\n }\n } else if (typeof google != 'undefined' && google.colab.kernel != null) {\n var comm_promise = google.colab.kernel.comms.open(comm_id)\n comm_promise.then((comm) => {\n window.PyViz.comms[comm_id] = comm;\n if (msg_handler) {\n var messages = comm.messages[Symbol.asyncIterator]();\n function processIteratorResult(result) {\n var message = result.value;\n var content = {data: message.data};\n var metadata = message.metadata || {comm_id};\n var msg = {content, metadata}\n msg_handler(msg);\n return messages.next().then(processIteratorResult);\n }\n return messages.next().then(processIteratorResult);\n }\n }) \n var sendClosure = (data, metadata, buffers, disposeOnDone) => {\n return comm_promise.then((comm) => {\n comm.send(data, metadata, buffers, disposeOnDone);\n });\n 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nchildren = toinsert.length;\n var html_node = toinsert[nchildren-1].children[0];\n html_node.innerHTML = output.data[HTML_MIME_TYPE];\n var scripts = [];\n var nodelist = html_node.querySelectorAll(\"script\");\n for (var i in nodelist) {\n if (nodelist.hasOwnProperty(i)) {\n scripts.push(nodelist[i])\n }\n }\n\n scripts.forEach( function (oldScript) {\n var newScript = document.createElement(\"script\");\n var attrs = [];\n var nodemap = oldScript.attributes;\n for (var j in nodemap) {\n if (nodemap.hasOwnProperty(j)) {\n attrs.push(nodemap[j])\n }\n }\n attrs.forEach(function(attr) { newScript.setAttribute(attr.name, attr.value) });\n newScript.appendChild(document.createTextNode(oldScript.innerHTML));\n oldScript.parentNode.replaceChild(newScript, oldScript);\n });\n if (JS_MIME_TYPE in output.data) {\n toinsert[nchildren-1].children[1].textContent = output.data[JS_MIME_TYPE];\n }\n output_area._hv_plot_id = id;\n if ((window.Bokeh !== undefined) && (id in Bokeh.index)) {\n window.PyViz.plot_index[id] = Bokeh.index[id];\n } else {\n window.PyViz.plot_index[id] = null;\n }\n } else if (output.metadata[EXEC_MIME_TYPE][\"server_id\"] !== undefined) {\n var bk_div = document.createElement(\"div\");\n bk_div.innerHTML = output.data[HTML_MIME_TYPE];\n var script_attrs = bk_div.children[0].attributes;\n for (var i = 0; i < script_attrs.length; i++) {\n toinsert[toinsert.length - 1].childNodes[1].setAttribute(script_attrs[i].name, script_attrs[i].value);\n }\n // store reference to server id on output_area\n output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n }\n}\n\n/**\n * Handle when an output is cleared or removed\n */\nfunction handle_clear_output(event, handle) {\n var id = handle.cell.output_area._hv_plot_id;\n var server_id = handle.cell.output_area._bokeh_server_id;\n if (((id === undefined) || !(id in PyViz.plot_index)) && (server_id !== undefined)) { return; }\n var comm = 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handle) {\n", + " handle_clear_output(event, {cell: {output_area: handle.output_area}})\n", + " handle_add_output(event, handle)\n", + "}\n", + "\n", + "function register_renderer(events, OutputArea) {\n", + " function append_mime(data, metadata, element) {\n", + " // create a DOM node to render to\n", + " var toinsert = this.create_output_subarea(\n", + " metadata,\n", + " CLASS_NAME,\n", + " EXEC_MIME_TYPE\n", + " );\n", + " this.keyboard_manager.register_events(toinsert);\n", + " // Render to node\n", + " var props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n", + " render(props, toinsert[0]);\n", + " element.append(toinsert);\n", + " return toinsert\n", + " }\n", + "\n", + " events.on('output_added.OutputArea', handle_add_output);\n", + " events.on('output_updated.OutputArea', handle_update_output);\n", + " events.on('clear_output.CodeCell', handle_clear_output);\n", + " events.on('delete.Cell', handle_clear_output);\n", + " events.on('kernel_ready.Kernel', handle_kernel_cleanup);\n", + "\n", + " OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n", + " safe: true,\n", + " index: 0\n", + " });\n", + "}\n", + "\n", + "if (window.Jupyter !== undefined) {\n", + " try {\n", + " var events = require('base/js/events');\n", + " var OutputArea = require('notebook/js/outputarea').OutputArea;\n", + " if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n", + " register_renderer(events, OutputArea);\n", + " }\n", + " } catch(err) {\n", + " }\n", + "}\n" + ], + "application/vnd.holoviews_load.v0+json": "\nif ((window.PyViz === undefined) || (window.PyViz instanceof HTMLElement)) {\n window.PyViz = {comms: {}, comm_status:{}, kernels:{}, receivers: {}, plot_index: []}\n}\n\n\n function JupyterCommManager() {\n }\n\n JupyterCommManager.prototype.register_target = function(plot_id, comm_id, msg_handler) {\n if (window.comm_manager || ((window.Jupyter !== undefined) && (Jupyter.notebook.kernel != null))) {\n var 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1].childNodes[1].setAttribute(script_attrs[i].name, script_attrs[i].value);\n }\n // store reference to server id on output_area\n output_area._bokeh_server_id = output.metadata[EXEC_MIME_TYPE][\"server_id\"];\n }\n}\n\n/**\n * Handle when an output is cleared or removed\n */\nfunction handle_clear_output(event, handle) {\n var id = handle.cell.output_area._hv_plot_id;\n var server_id = handle.cell.output_area._bokeh_server_id;\n if (((id === undefined) || !(id in PyViz.plot_index)) && (server_id !== undefined)) { return; }\n var comm = window.PyViz.comm_manager.get_client_comm(\"hv-extension-comm\", \"hv-extension-comm\", function () {});\n if (server_id !== null) {\n comm.send({event_type: 'server_delete', 'id': server_id});\n return;\n } else if (comm !== null) {\n comm.send({event_type: 'delete', 'id': id});\n }\n delete PyViz.plot_index[id];\n if ((window.Bokeh !== undefined) & (id in window.Bokeh.index)) {\n var doc = window.Bokeh.index[id].model.document\n doc.clear();\n const i = window.Bokeh.documents.indexOf(doc);\n if (i > -1) {\n window.Bokeh.documents.splice(i, 1);\n }\n }\n}\n\n/**\n * Handle kernel restart event\n */\nfunction handle_kernel_cleanup(event, handle) {\n delete PyViz.comms[\"hv-extension-comm\"];\n window.PyViz.plot_index = {}\n}\n\n/**\n * Handle update_display_data messages\n */\nfunction handle_update_output(event, handle) {\n handle_clear_output(event, {cell: {output_area: handle.output_area}})\n handle_add_output(event, handle)\n}\n\nfunction register_renderer(events, OutputArea) {\n function append_mime(data, metadata, element) {\n // create a DOM node to render to\n var toinsert = this.create_output_subarea(\n metadata,\n CLASS_NAME,\n EXEC_MIME_TYPE\n );\n this.keyboard_manager.register_events(toinsert);\n // Render to node\n var props = {data: data, metadata: metadata[EXEC_MIME_TYPE]};\n render(props, toinsert[0]);\n element.append(toinsert);\n return toinsert\n }\n\n events.on('output_added.OutputArea', handle_add_output);\n events.on('output_updated.OutputArea', handle_update_output);\n events.on('clear_output.CodeCell', handle_clear_output);\n events.on('delete.Cell', handle_clear_output);\n events.on('kernel_ready.Kernel', handle_kernel_cleanup);\n\n OutputArea.prototype.register_mime_type(EXEC_MIME_TYPE, append_mime, {\n safe: true,\n index: 0\n });\n}\n\nif (window.Jupyter !== undefined) {\n try {\n var events = require('base/js/events');\n var OutputArea = require('notebook/js/outputarea').OutputArea;\n if (OutputArea.prototype.mime_types().indexOf(EXEC_MIME_TYPE) == -1) {\n register_renderer(events, OutputArea);\n }\n } catch(err) {\n }\n}\n" + }, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "text/html": [ + "" + ] + }, + "metadata": {}, + "output_type": "display_data" + } + ], + "source": [ + "import act\n", + "import glob\n", + "import xarray as xr\n", + "import hvplot.xarray\n", + "import holoviews as hv\n", + "hv.extension(\"bokeh\")" + ] + }, + { + "cell_type": "markdown", + "id": "f4ff3200-bcab-456f-a5f9-0d6015615252", + "metadata": {}, + "source": [ + "## Data Access" + ] + }, + { + "cell_type": "code", + "execution_count": 7, + "id": "3c382f79-1bd9-40af-b0ba-2e3f27113b30", + "metadata": { + "collapsed": true, + "jupyter": { + "outputs_hidden": true + }, + "scrolled": true + }, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "[DOWNLOADING] gucwbpluvio2M1.a1.20220317.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220318.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220319.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220320.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220321.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220322.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220323.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220324.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220325.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220326.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220327.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220328.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220329.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220330.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220331.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220224.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211201.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211202.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211203.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211206.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211207.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211208.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211209.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211216.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211217.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211218.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211222.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211224.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211225.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211226.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211227.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211228.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211229.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220102.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220109.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220110.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220112.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220111.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220113.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220116.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220122.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220124.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220127.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220130.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220131.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220202.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220201.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220204.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220205.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220213.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220217.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220221.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220219.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220220.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211204.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211205.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211211.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211210.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211213.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211212.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211214.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211215.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211219.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211220.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211221.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211223.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211231.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20211230.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220101.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220103.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220104.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220106.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220105.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220107.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220108.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220114.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220115.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220117.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220118.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220120.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220119.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220121.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220123.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220125.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220126.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220128.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220129.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220203.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220207.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220206.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220209.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220208.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220210.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220211.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220212.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220215.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220214.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220216.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220218.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220223.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220222.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220226.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220225.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220227.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220228.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220301.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220304.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220302.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220303.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220306.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220305.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220307.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220308.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220309.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220310.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220311.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220312.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220313.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220314.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220315.000000.nc\n", + "[DOWNLOADING] gucwbpluvio2M1.a1.20220316.000000.nc\n", + "\n", + "If you use these data to prepare a publication, please cite:\n", + "\n", + "Wang, D., Jane, M., Cromwell, E., Sturm, M., Irving, K., Delamere, J., &\n", + "Mockaitis, M. Weighing Bucket Precipitation Gauge (WBPLUVIO2). Atmospheric\n", + "Radiation Measurement (ARM) User Facility. https://doi.org/10.5439/1338194\n", + "\n" + ] + } + ], + "source": [ + "\n", + "files = act.discovery.download_arm_data(\n", + " \"mgrover4\", \"176e1559b67be630\", \"gucwbpluvio2M1.a1\", \"2021-12-01\", \"2022-03-31\"\n", + ")" + ] + }, + { + "cell_type": "markdown", + "id": "132957c7-c1f0-486a-8e63-8456c0f6402e", + "metadata": {}, + "source": [ + "## Load Data into Xarray and Compute Accumulation Using ACT" + ] + }, + { + "cell_type": "code", + "execution_count": 10, + "id": "c45147a8-96ff-4d79-b974-546636832ba4", + "metadata": {}, + "outputs": [], + "source": [ + "files = sorted(glob.glob(\"gucwbpluvio2M1.a1/*\"))" + ] + }, + { + "cell_type": "code", + "execution_count": 29, + "id": "f89b1d83-aba1-4ebf-898f-7ec6fc91ee82", + "metadata": {}, + "outputs": [], + "source": [ + "ds = xr.open_mfdataset(files, engine='netcdf4')" + ] + }, + { + "cell_type": "code", + "execution_count": 30, + "id": "831e0a6f-6dfe-4f93-8136-df4757a8426c", + "metadata": {}, + "outputs": [], + "source": [ + "gauge_precip_accum = act.utils.accumulate_precip(ds.where(ds.pluvio_status == 0), \"intensity_rtnrt\").intensity_rtnrt_accumulated.compute()" + ] + }, + { + "cell_type": "markdown", + "id": "f21fb9a5-98e3-4d41-b332-7200910809f3", + "metadata": {}, + "source": [ + "## Visualize our Data" + ] + }, + { + "cell_type": "markdown", + "id": "0060dc3c-e71e-47d5-95de-54c1fccfb9c0", + "metadata": {}, + "source": [ + "### Entire Season" + ] + }, + { + "cell_type": "code", + "execution_count": 31, + "id": "5ef83af5-f4e5-4267-bde6-b47a8ebee423", + "metadata": {}, + "outputs": [ + { + "data": {}, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "application/vnd.holoviews_exec.v0+json": "", + "text/html": [ + "
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Datetemp ºC (ºF)cm (inches)Snow accumulation (cm)Liquid equivalent (in)Accumulation Ratio
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12021-12-02-8 (18)12½ (55)0.00.0#DIV/0!
22021-12-03-8½ (17)11½ (53)0.00.0#DIV/0!
32021-12-04-8½ (17)9½ (49)0.00.0#DIV/0!
42021-12-05-8 (18)5½ (42)0.00.0#DIV/0!
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1782022-05-29-½ (31)13½ (56)0.00.0#DIV/0!
1792022-05-30-2½ (27)5½ (42)9.00.57.086614
1802022-05-31-5½ (22)11 (52)2.00.17.874016
181NaTNaNNaNNaNNaNNaN
182NaTNaNNaNNaNNaN#DIV/0!
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183 rows × 6 columns

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" + ], + "text/plain": [ + " Date temp ºC (ºF) cm (inches) Snow accumulation (cm) \\\n", + "0 2021-12-01 -7½ (18) 11½ (53) 0.0 \n", + "1 2021-12-02 -8 (18) 12½ (55) 0.0 \n", + "2 2021-12-03 -8½ (17) 11½ (53) 0.0 \n", + "3 2021-12-04 -8½ (17) 9½ (49) 0.0 \n", + "4 2021-12-05 -8 (18) 5½ (42) 0.0 \n", + ".. ... ... ... ... \n", + "178 2022-05-29 -½ (31) 13½ (56) 0.0 \n", + "179 2022-05-30 -2½ (27) 5½ (42) 9.0 \n", + "180 2022-05-31 -5½ (22) 11 (52) 2.0 \n", + "181 NaT NaN NaN NaN \n", + "182 NaT NaN NaN NaN \n", + "\n", + " Liquid equivalent (in) Accumulation Ratio \n", + "0 0.0 #DIV/0! \n", + "1 0.0 #DIV/0! \n", + "2 0.0 #DIV/0! \n", + "3 0.0 #DIV/0! \n", + "4 0.0 #DIV/0! \n", + ".. ... ... \n", + "178 0.0 #DIV/0! \n", + "179 0.5 7.086614 \n", + "180 0.1 7.874016 \n", + "181 NaN NaN \n", + "182 NaN #DIV/0! \n", + "\n", + "[183 rows x 6 columns]" + ] + }, + "execution_count": 90, + "metadata": {}, + "output_type": "execute_result" + } + ], + "source": [ + "df = pd.read_excel('https://docs.google.com/spreadsheets/d/' + \n", + " '1S7xZPT0IoJk0bWt34BKvyT9xzPbI1Tv6q28M3ZqiMpE' +\n", + " '/export?gid=0&format=xlsx',\n", + " sheet_name='Sheet1')\n", + "df" + ] + }, + { + "cell_type": "markdown", + "id": "394513bd-d027-441b-b5da-6cefe551dd3a", + "metadata": {}, + "source": [ + "### Convert all units to millimeters and set the date column as the index" + ] + }, + { + "cell_type": "code", + "execution_count": 91, + "id": "ddce9357-379b-45c6-bd4b-aacc208cee8a", + "metadata": {}, + "outputs": [], + "source": [ + "# Add units\n", + "swe_inches = df[\"Liquid equivalent (in)\"].astype(float).values * units.inches\n", + "accum_cm = df[\"Snow accumulation (cm)\"].astype(float).values * units.centimeter\n", + "\n", + "# Do the conversion using MetPy\n", + "swe_mm = swe_inches.to(\"mm\")\n", + "accum_mm = accum_cm.to(\"mm\")\n", + "\n", + "# Strip Units\n", + "df[\"swe_mm\"] = swe_mm.m\n", + "df[\"accum_mm\"] = accum_mm.m\n", + "\n", + "# Set the index to date\n", + "df[\"Date\"] = pd.to_datetime(df.Date)\n", + "df = df.set_index(\"Date\")\n", + "\n", + "# Convert to xarray!\n", + "gothic_ds = df.to_xarray().dropna(\"Date\")" + ] + }, + { + "cell_type": "markdown", + "id": "aaf24c68-225c-4ef5-b190-84cc907dcc0a", + "metadata": {}, + "source": [ + "### Visualize the Gothic Colorado Snow Accumulation and Snow Water Liquid Equivalent (SWE)" + ] + }, + { + "cell_type": "code", + "execution_count": 92, + "id": "b1434c15-8957-42e8-9aa9-942bf0ab408f", + "metadata": {}, + "outputs": [ + { + "data": {}, + "metadata": {}, + "output_type": "display_data" + }, + { + "data": { + "application/vnd.holoviews_exec.v0+json": "", + "text/html": [ + "
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