From ed7db9cce78bec17969a1e305b5df0d05d86e873 Mon Sep 17 00:00:00 2001
From: Patrick Metzger <patrick@micracum-pipe-docker.ibsm.miracum>
Date: Wed, 16 Sep 2020 15:56:16 +0200
Subject: [PATCH] tumorOnly pipeline

---
 miracum_pipe.sh | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/miracum_pipe.sh b/miracum_pipe.sh
index c0da663..518188f 100755
--- a/miracum_pipe.sh
+++ b/miracum_pipe.sh
@@ -15,7 +15,7 @@ function usage() {
 }
 
 PARAM_DOCKER_REPO_NAME="agboerries/miracum_pipe"
-readonly VALID_PROTOCOLS=("wes panel")
+readonly VALID_PROTOCOLS=("wes panel tumorOnly")
 
 while getopts t:p:d:v:n:fsrh option; do
   case "${option}" in