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"node_modules/word-wrap": { - "version": "1.2.5", - "resolved": "https://registry.npmjs.org/word-wrap/-/word-wrap-1.2.5.tgz", - "integrity": "sha512-BN22B5eaMMI9UMtjrGd5g5eCYPpCPDUy0FJXbYsaT5zYxjFOckS53SQDE3pWkVoWpHXVb3BrYcEN4Twa55B5cA==", - "engines": { - "node": ">=0.10.0" - } - }, "node_modules/wordwrap": { "version": "1.0.0", "resolved": "https://registry.npmjs.org/wordwrap/-/wordwrap-1.0.0.tgz", @@ -8545,9 +7986,9 @@ } }, "node_modules/zincjs": { - "version": "1.8.3", - "resolved": "https://registry.npmjs.org/zincjs/-/zincjs-1.8.3.tgz", - "integrity": "sha512-jSeSNahPEpoF81R4wb3MBvjshBh4s7hKUgJVCclferkPmIGyKxcfy1qUnMPPxJBitoDkys2jlEA1EiySBOZqPA==", + "version": "1.9.0", + "resolved": "https://registry.npmjs.org/zincjs/-/zincjs-1.9.0.tgz", + "integrity": "sha512-9YG/jqjVhZECRK85ak8H0MAFU4pyjp+ZbxnHI0zs4s/dOqlhVk/KczwB6aKupjtxGGFx0HK8ujoUJH+gT6K/1w==", "dependencies": { "css-element-queries": "^1.2.2", "lodash": "^4.17.19", diff --git a/package.json b/package.json index 9bc53c3..f5a03be 100644 --- a/package.json +++ b/package.json @@ -1,6 +1,6 @@ { "name": "@abi-software/scaffoldvuer", - "version": "1.2.1", + "version": "1.3.0-beta.0", "license": "Apache-2.0", "repository": { "type": "git", @@ -41,7 +41,7 @@ "*.js" ], "dependencies": { - "@abi-software/map-utilities": "^0.0.0-beta.4", + "@abi-software/map-utilities": "^1.0.0", "@abi-software/sparc-annotation": "^0.3.1", "@abi-software/svg-sprite": "^1.0.0", "@element-plus/icons-vue": "^2.3.1", @@ -55,7 +55,7 @@ "vue": "^3.4.15", "vue-router": "^4.2.5", "vue3-component-svg-sprite": "^0.0.1", - "zincjs": "^1.8.3" + "zincjs": "^1.9.0" }, "devDependencies": { "@vitejs/plugin-vue": "^4.6.2", diff --git a/src/App.vue b/src/App.vue index 800b99f..0782460 100644 --- a/src/App.vue +++ b/src/App.vue @@ -27,10 +27,12 @@ :view-u-r-l="viewURL" :format="format" :marker-labels="markerLabels" + :enableLocalAnnotations="false" @open-map="openMap" @on-ready="onReady" @scaffold-selected="onSelected" @scaffold-navigated="onNavigated" + @user-primitives-updated="userPrimitivesUpdated" @timeChanged="updateCurrentTime" @zinc-object-added="objectAdded" @vue:mounted="viewerMounted" @@ -114,9 +116,6 @@ Capture - - Change Markers - @@ -138,6 +137,25 @@ + + + + Export Annotations + + + + + + + + + + @@ -297,6 +315,7 @@ import { ElInputNumber as InputNumber, ElPopover as Popover, ElRow as Row, + ElUpload as Upload, ElSwitch as Switch, } from "element-plus"; import { useRoute, useRouter } from 'vue-router' @@ -305,6 +324,18 @@ import '@abi-software/map-utilities/dist/style.css' let texture_prefix = undefined; +const writeTextFile = (filename, data) => { + let dataStr = + "data:text/json;charset=utf-8," + + encodeURIComponent(JSON.stringify(data)); + let hrefElement = document.createElement("a"); + document.body.append(hrefElement); + hrefElement.download = filename; + hrefElement.href = dataStr; + hrefElement.click(); + hrefElement.remove(); +} + export default { name: "app", components: { @@ -317,6 +348,7 @@ export default { Popover, Row, Switch, + Upload, ElIconFolderOpened, ElIconSetting, DropZone, @@ -327,7 +359,7 @@ export default { data: function () { return { consoleOn: true, - createPoints: false, + createLinesWithNormal: false, url: undefined, input: undefined, displayUI: true, @@ -342,7 +374,7 @@ export default { tumbleOn: false, tumbleDirection: [1.0, 0.0], showColourPicker: true, - markerCluster: true, + markerCluster: false, minimapSettings: { x_offset: 16, y_offset: 50, @@ -350,22 +382,7 @@ export default { height: 128, align: "top-right", }, - markerLabels: { - "body proper": 9, - "Spinal cord": 8, - "lung": 11, - "stomach": 12, - "urinary bladder": 11, - "Brainstem": 11, - "heart": 9, - "skin epidermis": 5, - "Diaphragm": 7, - "colon": 9, - "vagus nerve": 3, - "myenteric nerve plexus": 2, - "esophagus": 1, - "urethra": 3 - }, + markerLabels: { }, render: true, region: "", viewURL: "", @@ -389,7 +406,6 @@ export default { router: useRouter(), ElIconSetting: shallowRef(ElIconSetting), ElIconFolderOpened: shallowRef(ElIconFolderOpened), - coordinatesClicked: [], auto: NaN }; }, @@ -400,6 +416,28 @@ export default { tumbleOn: function () { this.autoTumble(); }, + markerCluster: function(val) { + if (val) { + this.markerLabels = { + "body proper": 9, + "Spinal cord": 8, + "lung": 11, + "stomach": 12, + "urinary bladder": 11, + "Brainstem": 11, + "heart": 9, + "skin epidermis": 5, + "Diaphragm": 7, + "colon": 9, + "vagus nerve": 3, + "myenteric nerve plexus": 2, + "esophagus": 1, + "urethra": 3 + }; + } else { + this.markerLabels = { }; + } + }, "route.query": { handler: "parseQuery", deep: true, @@ -426,15 +464,8 @@ export default { methods: { exportGLTF: function () { this.$refs.scaffold.exportGLTF(false).then((data) => { - let dataStr = - "data:text/json;charset=utf-8," + - encodeURIComponent(JSON.stringify(data)); - let hrefElement = document.createElement("a"); - document.body.append(hrefElement); - hrefElement.download = `export.gltf`; - hrefElement.href = dataStr; - hrefElement.click(); - hrefElement.remove(); + const filename = 'export' + JSON.stringify(new Date()) + '.gltf'; + writeTextFile(filename, data); }); }, exportGLB: function () { @@ -449,14 +480,26 @@ export default { hrefElement.remove(); }); }, + exportLocalAnnotations: function() { + const annotations = this.$refs.scaffold.getLocalAnnotations(); + const filename = 'scaffoldAnnotations' + JSON.stringify(new Date()) + '.json'; + writeTextFile(filename, annotations); + }, + onReaderLoad: function(event) { + const annotationsList = JSON.parse(event.target.result); + this.$refs.scaffold.importLocalAnnotations(annotationsList); + }, + importLocalAnnotations: function() { + const selectedFile = document.getElementById("annotations-upload").files[0]; + const reader = new FileReader(); + reader.onload = this.onReaderLoad; + reader.readAsText(selectedFile); + }, objectAdded: function (zincObject) { if (this.consoleOn) { console.log(zincObject) console.log(this.$refs.scaffold.$module.scene.getBoundingBox()) } - if (this._objects.length === 0) { - zincObject.setMarkerMode("on"); - } if (zincObject.isGeometry) { zincObject._lod._material.wireframe = this.wireframe; } @@ -530,6 +573,9 @@ export default { viewModelClicked: function (location) { this.input = location; }, + userPrimitivesUpdated: function (event) { + console.log(event); + }, screenCapture: function () { this.$refs.scaffold.captureScreenshot("capture.png"); }, @@ -601,40 +647,37 @@ export default { } this.scaffoldRef = this.$refs.scaffold; }, - addLines: function (coord) { - if (this.coordinatesClicked.length === 1) { + addLinesWithNormal: function (coord, normal) { + if (coord && normal) { + const newCoords = [ + coord[0] + normal.x * 1000, + coord[1] + normal.y * 1000, + coord[2] + normal.z * 1000, + ]; const returned = this.$refs.scaffold.$module.scene.createLines( - "test", - "lines", - [this.coordinatesClicked[0], coord], - 0x00ee22, - ); - this.coordinatesClicked.length = 0; - if (this.consoleOn) console.log(returned); - } else { - this.coordinatesClicked.push(coord); + "test", + "lines", + [newCoords, coord], + 0x00ee22, + ); + returned.zincObject.isEditable = true; + if (this.consoleOn) console.log(returned); } }, onSelected: function (data) { if (data && data.length > 0 && data[0].data.group) { - if (this.consoleOn) console.log(data[0]); - if (this.createPoints && data[0].extraData.worldCoords) { - const returned = this.$refs.scaffold.$module.scene.createPoints( - "test", - "points", - [data[0].extraData.worldCoords], - undefined, - 0x0022ee, - ); + if (this.consoleOn) console.log(data[0], data[0].extraData.intersected); + if (this.createLinesWithNormal && data[0].extraData.worldCoords && + data[0].extraData.intersected?.face) { + this.addLinesWithNormal(data[0].extraData.worldCoords, data[0].extraData.intersected.face.normal) } delete this.route.query["viewURL"]; - this.$refs.scaffold.showRegionTooltipWithAnnotations(data, false, true); + //this.$refs.scaffold.showRegionTooltipWithAnnotations(data, false, true); if (this.onClickMarkers) this.$refs.scaffold.setMarkerModeForObjectsWithName(data[0].data.group, "on"); } + if (this.consoleOn) console.log(data); }, - changeMarkers: function () { - this.markerLabels = {"left atrium": 3, "epicardium": 4 , "stomach": 5}; - }, + onNavigated: function (data) { this.zoom = data.zoom; this.pos[0] = data.target[0]; @@ -828,4 +871,9 @@ body { svg.map-icon { color: $app-primary-color; } + +input[type="file"] { + display: none; +} + diff --git a/src/components/LinesControls.vue b/src/components/LinesControls.vue index eecbeea..8b3c285 100644 --- a/src/components/LinesControls.vue +++ b/src/components/LinesControls.vue @@ -5,7 +5,7 @@ Width: - + - + - - - - - - Move - - - - - - - - + @@ -55,7 +99,8 @@ // limited support to line width import { shallowRef } from 'vue'; import { - moveLine, + getLineDistance, + moveAndExtendLine, } from "../scripts/Utilities.js"; import { ElButton as Button, @@ -63,15 +108,12 @@ import { ElContainer as Container, ElInputNumber as InputNumber, ElMain as Main, - ElSelect as Select, ElSlider as Slider, - ElOption as Option, } from "element-plus"; -import { +import{ ArrowLeft as ElIconArrowLeft, ArrowRight as ElIconArrowRight, } from '@element-plus/icons-vue'; - /** * A component to control the opacity of the target object. */ @@ -83,9 +125,7 @@ export default { Container, InputNumber, Main, - Select, Slider, - Option, ElIconArrowLeft, ElIconArrowRight, }, @@ -96,23 +136,86 @@ export default { }, data: function () { return { + adjust: 0, + pAdjust: 0, + lengthScale: 0, + distance: 0, + newDistance: 0, width: 1, - unit: 0.1, + currentIndex: 0, ElIconArrowLeft: shallowRef(ElIconArrowLeft), ElIconArrowRight: shallowRef(ElIconArrowRight), + edited: false, }; }, + watch: { + "createData.faceIndex": { + handler: function (value) { + if (this._zincObject?.isLines2) { + this.currentIndex = value; + this.distance = getLineDistance(this._zincObject, this.currentIndex); + } + }, + immediate: true, + }, + }, mounted: function () { this._zincObject = undefined; }, methods: { - onMoveClick: function(unit) { - moveLine(this._zincObject, this.createData.faceIndex, unit); + changeIndex: function(increment) { + if (increment) { + const dist = getLineDistance(this._zincObject, this.currentIndex + 1); + if (dist > 0) { + this.currentIndex++; + this.reset(); + } + } else { + this.currentIndex--; + this.reset(); + } + }, + onLengthInput: function() { + if (this.newDistance !== 0) { + this.distance = this.newDistance; + this.edited = moveAndExtendLine( + this._zincObject, this.currentIndex, this.newDistance, true) || this.edited; + } else { + this.newDistance = this.distance; + } + }, + onLengthSliding: function() { + this.newDistance = Math.pow(10, this.lengthScale) * this.distance; + this.edited = moveAndExtendLine( + this._zincObject, this.currentIndex, this.newDistance, true) || this.edited; + }, + onMoveSliding: function() { + const diff = (this.adjust - this.pAdjust) * this.distance; + this.edited = moveAndExtendLine( + this._zincObject, this.currentIndex, diff, false) || this.edited; + this.pAdjust = this.adjust; + }, + reset: function() { + this.adjust = 0; + this.pAdjust = 0; + this.lengthScale = 0; + this.distance = getLineDistance(this._zincObject, this.currentIndex); + this.newDistance = this.distance; + if (this.edited) { + this.$emit("primitivesUpdated", this._zincObject); + this.edited = false; + } }, setObject: function (object) { - if (object.isLines) { + this.currentIndex = -1; + this.distance = 0; + if (object.isLines2) { this._zincObject = object; this.width = this._zincObject.getMorph().material.linewidth; + if (object.isEditable) { + this.currentIndex = 0; + this.distance = getLineDistance(object, this.currentIndex); + } } else { this._zincObject = undefined; this.linewidth = 10; diff --git a/src/components/PointsControls.vue b/src/components/PointsControls.vue index def3e8d..0410bb0 100644 --- a/src/components/PointsControls.vue +++ b/src/components/PointsControls.vue @@ -49,22 +49,100 @@ +